5
votes
1
answer
163
views
1
answer
Using eset while parsing GSE file located in a path
geoquery geo written 24 days ago by mahm20 • updated 24 days ago by Sean Davis21k
1
vote
1
answer
81
views
1
answer
Filtering the expression values of a gene from GEO
microarray geo written 6 weeks ago by mahm20 • updated 5 weeks ago by James W. MacDonald47k
2
votes
1
answer
89
views
1
answer
error reading GSE using getGEO()
R geo getgeo written 9 weeks ago by jaleh.amo0
3
votes
1
answer
84
views
1
answer
1
vote
1
answer
139
views
1
answer
0
votes
1
answer
110
views
1
answer
GEOquery using keywords in R
geoquery geometadb geo written 3 months ago by Didi10 • updated 3 months ago by Sean Davis21k
0
votes
0
answers
82
views
0
answers
1
vote
1
answer
133
views
1
answer
GEOquery: Diagnosing SOFT file error
geoquery geo soft files geo data written 6 months ago by supermanrocketboy10 • updated 6 months ago by Sean Davis21k
1
vote
2
answers
652
views
2
answers
GEOquery http:// url error
microarray geoquery error geo getgeo written 17 months ago by jblack290 • updated 8 months ago by Sean Davis21k
3
votes
1
answer
679
views
1
answer
10
votes
1
answer
400
views
1
answer
SummarizedExperiment object from GEOquery obtained GSE
geoquery summarizedexperiment matrix geo written 8 months ago by rbronste60 • updated 8 months ago by Sean Davis21k
1
vote
1
answer
320
views
1
answer
0
votes
0
answers
395
views
0
answers
1
vote
3
answers
232
views
3
answers
Getting gene annotation for a GEO dataset
geo written 14 months ago by yuvallb0
2
votes
1
answer
590
views
1
answer
0
votes
1
answer
578
views
1
answer
Question about neqc and GEO illumina files
limma illumina geo neqc written 2.3 years ago by akridgerunner10 • updated 2.3 years ago by Gordon Smyth35k
2
votes
2
answers
499
views
2
answers
read bead-level data directly by lumi
lumi geo bead-level written 2.5 years ago by gnilihzeux0 • updated 2.5 years ago by Mike Smith2.9k
1
vote
1
answer
503
views
1
answer
readIllumina couln't read bead-level txt file from GEO raw data
beadarray lumi geo bead-level written 2.5 years ago by gnilihzeux0 • updated 2.5 years ago by Mike Smith2.9k
0
votes
1
answer
415
views
1
answer
data handling from GSE22216 to exprSet object
geo written 2.7 years ago by maedakus10 • updated 2.7 years ago by Mike Smith2.9k
0
votes
3
answers
588
views
3
answers
collect an expression dataset
affydata limma cel expresiondataset geo written 2.8 years ago by libya.tahani0 • updated 2.8 years ago by Robert Castelo2.2k
0
votes
1
answer
422
views
1
answer
Getting data from GEO
geoquery affymetrix microarrays geo written 2.8 years ago by libya.tahani0 • updated 2.8 years ago by James W. MacDonald47k
5
votes
3
answers
768
views
3
answers
what conditions affect my gene (with limma?)
limma experimental design geo written 3.1 years ago by mamillerpa0 • updated 3.1 years ago by Gordon Smyth35k
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