5
votes
1
answer
191
views
1
answer
Using eset while parsing GSE file located in a path
geoquery geo written 10 weeks ago by mahm20 • updated 10 weeks ago by Sean Davis21k
1
vote
1
answer
105
views
1
answer
Filtering the expression values of a gene from GEO
microarray geo written 3 months ago by mahm20 • updated 3 months ago by James W. MacDonald48k
2
votes
1
answer
131
views
1
answer
error reading GSE using getGEO()
R geo getgeo written 3 months ago by jaleh.amo0
3
votes
1
answer
108
views
1
answer
1
vote
1
answer
186
views
1
answer
0
votes
1
answer
136
views
1
answer
GEOquery using keywords in R
geoquery geometadb geo written 5 months ago by Didi10 • updated 5 months ago by Sean Davis21k
0
votes
0
answers
107
views
0
answers
1
vote
1
answer
166
views
1
answer
GEOquery: Diagnosing SOFT file error
geoquery geo soft files geo data written 8 months ago by supermanrocketboy10 • updated 8 months ago by Sean Davis21k
1
vote
2
answers
746
views
2
answers
GEOquery http:// url error
microarray geoquery error geo getgeo written 19 months ago by jblack290 • updated 9 months ago by Sean Davis21k
3
votes
1
answer
791
views
1
answer
10
votes
1
answer
441
views
1
answer
SummarizedExperiment object from GEOquery obtained GSE
geoquery summarizedexperiment matrix geo written 10 months ago by rbronste60 • updated 10 months ago by Sean Davis21k
1
vote
1
answer
379
views
1
answer
0
votes
0
answers
418
views
0
answers
1
vote
3
answers
246
views
3
answers
Getting gene annotation for a GEO dataset
geo written 16 months ago by yuvallb0
2
votes
1
answer
628
views
1
answer
0
votes
1
answer
617
views
1
answer
Question about neqc and GEO illumina files
limma illumina geo neqc written 2.4 years ago by akridgerunner20 • updated 2.4 years ago by Gordon Smyth35k
2
votes
2
answers
525
views
2
answers
read bead-level data directly by lumi
lumi geo bead-level written 2.7 years ago by gnilihzeux0 • updated 2.7 years ago by Mike Smith3.1k
1
vote
1
answer
526
views
1
answer
readIllumina couln't read bead-level txt file from GEO raw data
beadarray lumi geo bead-level written 2.7 years ago by gnilihzeux0 • updated 2.7 years ago by Mike Smith3.1k
0
votes
1
answer
430
views
1
answer
data handling from GSE22216 to exprSet object
geo written 2.8 years ago by maedakus10 • updated 2.8 years ago by Mike Smith3.1k
0
votes
3
answers
603
views
3
answers
collect an expression dataset
affydata limma cel expresiondataset geo written 3.0 years ago by libya.tahani0 • updated 3.0 years ago by Robert Castelo2.2k
0
votes
1
answer
437
views
1
answer
Getting data from GEO
geoquery affymetrix microarrays geo written 3.0 years ago by libya.tahani0 • updated 3.0 years ago by James W. MacDonald48k
5
votes
3
answers
793
views
3
answers
what conditions affect my gene (with limma?)
limma experimental design geo written 3.2 years ago by mamillerpa0 • updated 3.2 years ago by Gordon Smyth35k
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