Showing: gsea • reset
Search
2
votes
1
answer
107
views
1
answer
Are singscore scores comparable between gene sets?
gsva gsea geneset subtypes singscore written 5 weeks ago by Pietro • 20 • updated 5 weeks ago by Robert Castelo • 2.3k
0
votes
1
answer
66
views
1
answer
Qusage/nlme package for adding random effects in gene set enrichment analysis
qusage gsea written 5 weeks ago by Diana • 10
0
votes
0
answers
53
views
0
answers
Useful of Normal Enrichment Score (NES) in GSEA
gsea written 6 weeks ago by aboumarshal • 0
3
votes
1
answer
139
views
1
answer
DESeq2 log2FC shrink before GSEA or not?
rnaseq deseq2 gsea gene espression written 7 weeks ago by bmreilly • 0 • updated 7 weeks ago by Michael Love ♦ 22k
3
votes
2
answers
94
views
2
answers
Enrichment Analysis with only GeneSymbols
R rna-seq gsea scrna-seq written 7 weeks ago by hamza_karakurt • 20 • updated 7 weeks ago by Peter Langfelder • 1.8k
0
votes
0
answers
239
views
0
answers
gseaplot vertical line
clusterprofiler gsea written 5 months ago by abelsousa • 0 • updated 3 months ago by Bioconductor Community ♦♦ 0
0
votes
1
answer
169
views
1
answer
GSEA using TFs as the gene set
gsea transcription factor binding site enrichment analysis written 5 months ago by tkapell • 0 • updated 5 months ago by lhuang7 • 30
0
votes
1
answer
167
views
1
answer
Using TPM of a specific isoform as a phenotype for gene set enrichment analysis
rnaseq deseq2 gsea tpm salmon rna seq written 6 months ago by leo_CD • 0 • updated 5 months ago by Michael Love ♦ 22k
0
votes
1
answer
189
views
1
answer
gene set enrichment analysis
gsea gsa written 6 months ago by Bogdan • 550 • updated 6 months ago by Gordon Smyth ♦ 37k
0
votes
0
answers
171
views
0
answers
Warning in bayes fit in MAST GSEA
gsea mast bayesglm.fit written 7 months ago by santos22903 • 0
2
votes
1
answer
323
views
1
answer
GSEA for RNA-seq analysis
limma gsea ttest preranked gsea written 8 months ago by imalumberjack • 0 • updated 8 months ago by Gordon Smyth ♦ 37k
0
votes
0
answers
178
views
0
answers
Job: 2 Postdoc Positions in computational epigenetics and non-coding RNA analysis (#CNPD08)
chipseq job bioinformatician job rna-seq gsea python written 8 months ago by l.brown • 10
0
votes
0
answers
254
views
0
answers
fgsea p-values are mostly the same upon analysis
gsea fgsea sc-rnaseq written 9 months ago by atakanekiz • 20
0
votes
2
answers
259
views
2
answers
Issues in generating workable rank file for GSEA
gseabase deseq2 gsea pre-ranked gsea written 10 months ago by csijst • 0 • updated 10 months ago by Michael Love ♦ 22k
1
vote
0
answers
322
views
0
answers
ReactomePA / Reactome: GSEA error message
reactome gsea reactomepa fgsea written 10 months ago by martin.busch • 0
1
vote
1
answer
254
views
1
answer
Where is it possible to find gene sets in rdata format for GSEA ?
rattus norvegicus gsea written 12 months ago by Aurora • 10 • updated 12 months ago by Gordon Smyth ♦ 37k
2
votes
1
answer
570
views
1
answer
Clusterprofiler - MSigDB gene set analysis - Updated
clusterprofiler gsea msigdb written 13 months ago by thomasjenner333 • 0 • updated 13 months ago by Guangchuang Yu • 1.1k
1
vote
2
answers
333
views
2
answers
GSVA for single sample
gsva gsea ssgsea written 14 months ago by jaison75 • 10
0
votes
1
answer
345
views
1
answer
merging gseaResult objects
clusterprofiler gsea written 14 months ago by robmarin • 0 • updated 14 months ago by Guangchuang Yu • 1.1k
1
vote
0
answers
345
views
0
answers
Inconsistency of results GSEA clusterprofiler
clusterprofiler gsea written 15 months ago by Stane • 40
0
votes
0
answers
324
views
0
answers
GSEA-class file (.cls) parsing error message
gsea written 15 months ago by snguyen268 • 0
0
votes
0
answers
504
views
0
answers
gseaplot() function of clusterProfiler went wrong
clusterprofiler gsea written 17 months ago by giuseppe0525 • 0
2
votes
1
answer
1.3k
views
1
answer
GSEA using clusterProfiler
clusterprofiler gsea written 17 months ago by giuseppe0525 • 0
4
votes
1
answer
494
views
1
answer
GSEA using clusterprofileR
clusterprofiler gsea written 18 months ago by sup230 • 30 • updated 18 months ago by assaron • 150
0
votes
0
answers
301
views
0
answers
BioQC R package issue with broad gmt files
R gsea gmt bioqc written 18 months ago by Seymoo • 0
<prev • 55 results • page 1 of 3 • next >
Recent...
Replies
Votes
Awards • All »
Locations • All »
  • Denali, 5 minutes ago
  • United States, 1 hour ago
  • Greece/Athens/National Hellenic Research Foundation, 1 hour ago
  • Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia, 1 hour ago
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 87 users visited in the last hour