Showing: gseareset
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How to get t-statistic values using edgeR?
edger R gsea fgsea t-statistic written 5 weeks ago by Biologist70 • updated 5 weeks ago by Gordon Smyth37k
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166
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Are singscore scores comparable between gene sets?
gsva gsea geneset subtypes singscore written 3 months ago by Pietro20 • updated 3 months ago by Robert Castelo2.3k
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DESeq2 log2FC shrink before GSEA or not?
rnaseq deseq2 gsea gene espression written 3 months ago by bmreilly0 • updated 3 months ago by Michael Love23k
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126
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Enrichment Analysis with only GeneSymbols
R rna-seq gsea scrna-seq written 3 months ago by hamza_karakurt30 • updated 3 months ago by Peter Langfelder2.1k
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283
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gseaplot vertical line
clusterprofiler gsea written 7 months ago by abelsousa0 • updated 5 months ago by Bioconductor Community ♦♦ 0
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193
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GSEA using TFs as the gene set
gsea transcription factor binding site enrichment analysis written 7 months ago by tkapell0 • updated 7 months ago by lhuang730
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202
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gene set enrichment analysis
gsea gsa written 8 months ago by Bogdan550 • updated 8 months ago by Gordon Smyth37k
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211
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2
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361
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GSEA for RNA-seq analysis
limma gsea ttest preranked gsea written 10 months ago by imalumberjack0 • updated 10 months ago by Gordon Smyth37k
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292
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295
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Issues in generating workable rank file for GSEA
gseabase deseq2 gsea pre-ranked gsea written 12 months ago by csijst0 • updated 12 months ago by Michael Love23k
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368
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285
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Where is it possible to find gene sets in rdata format for GSEA ?
rattus norvegicus gsea written 13 months ago by Aurora10 • updated 13 months ago by Gordon Smyth37k
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Clusterprofiler - MSigDB gene set analysis - Updated
clusterprofiler gsea msigdb written 15 months ago by thomasjenner3330 • updated 15 months ago by Guangchuang Yu1.1k
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362
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GSVA for single sample
gsva gsea ssgsea written 16 months ago by jaison7510
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374
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merging gseaResult objects
clusterprofiler gsea written 16 months ago by robmarin0 • updated 16 months ago by Guangchuang Yu1.1k
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4
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GSEA using clusterprofileR
clusterprofiler gsea written 20 months ago by sup23030 • updated 20 months ago by assaron150
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