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Comment: Rsubread alignment crashes at 35%, valgrind indicates invalid writes
by
Yang Liao
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440
Your command line indicates that the input files are gzipped FASTA files. Can you share with us the index and the gzipped FASTA file that c…
Comment: limma plotMDS - logFC inverted?
by
James W. MacDonald
67k
Please don't add to existing posts. If you have a question, start a new post. But anyway, consider this
```
> library(limma)
> example("pl…
Comment: limma plotMDS - logFC inverted?
by
yifan
•
0
Hello, James. I found unexpected results in my MDS plot where S6 drifted away from its groups. Is there any way to check whether specific g…
Answer: WARNING: No Bioconductor dependencies detected.
by
Laurent Gatto
1.6k
Hi Katja,
If I understand correctly, you are focusing on the quantitative data. In this case, you won't need to depend on `Spectra`, or…
Comment: [DESeq2] time series strain-specific differences over time
by
Michael Love
42k
Yes, this gives mut vs wt at minute 15 comparing to baseline.
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