0
votes
0
answers
14
views
0
answers
1
vote
1
answer
90
views
1
answer
Outputting batch-effect free normalized counts
edaseq ruvseq svaseq written 13 days ago by llo0 • updated 12 days ago by davide risso490
3
votes
2
answers
85
views
2
answers
Batch effects between controls
ruvseq batch-effect written 19 days ago by llo0 • updated 19 days ago by James W. MacDonald45k
0
votes
1
answer
81
views
1
answer
How to use RUVSeq in clustering problems?
clustering ruvseq rna-seq written 6 weeks ago by bioinfo2001410 • updated 6 weeks ago by davide risso490
0
votes
1
answer
443
views
1
answer
2
votes
2
answers
539
views
2
answers
1
vote
1
answer
527
views
1
answer
0
votes
1
answer
145
views
1
answer
RNAseq Analysis using RUVs
rnaseq ruvseq R written 4 months ago by manish200720130 • updated 4 months ago by davide risso490
0
votes
1
answer
88
views
1
answer
How to generate heatmap for three groups
rnaseq ruvseq heatmap written 4 months ago by manish200720130 • updated 4 months ago by James W. MacDonald45k
2
votes
1
answer
173
views
1
answer
0
votes
1
answer
210
views
1
answer
Fundamental questions about DESeq2 and RUVs in targeted gene set of 500
deseq2 ruvseq written 6 months ago by grashow0 • updated 6 months ago by davide risso490
2
votes
1
answer
311
views
1
answer
0
votes
1
answer
406
views
1
answer
Can FPKM or TPM values be used as RUVs input ?
ruvseq ruv ruvg written 10 months ago by weiwsmiling0 • updated 9 months ago by davide risso490
0
votes
1
answer
230
views
1
answer
Appropriate to apply RUVSeq to exon bin counts for DEXSeq?
rnaseq dexseq ruvseq written 10 months ago by Cornwell, Adam110 • updated 9 months ago by davide risso490
0
votes
1
answer
261
views
1
answer
0
votes
2
answers
337
views
2
answers
0
votes
1
answer
300
views
1
answer
Can Normalized cpm values be used as RUVs input
rnaseq ruvseq written 14 months ago by sooby0 • updated 14 months ago by davide risso490
0
votes
2
answers
611
views
2
answers
How to use RUVseq with voom-limma for differential expression analysis?
limma ruvseq voom written 15 months ago by brainfood0 • updated 14 months ago by davide risso490
0
votes
4
answers
1.9k
views
4
answers
Normalised counts from RUVg in RUVSeq
rnaseq ruvseq ruvg written 2.5 years ago by Pauly Lin60 • updated 16 months ago by cbcb0
0
votes
3
answers
307
views
3
answers
2
votes
1
answer
262
views
1
answer
0
votes
5
answers
814
views
5
answers
RUVSeq DE analysis for data with replicate samples and 4 conditions
ruvseq written 2.2 years ago by sharvari gujja10 • updated 17 months ago by anthonycolombo600
1
vote
1
answer
271
views
1
answer
RUVSeq and Generalised Linear Mixed Model
ruvseq written 17 months ago by dustar19860 • updated 17 months ago by davide risso490
2
votes
2
answers
314
views
2
answers
1
vote
1
answer
474
views
1
answer
RUVSEq and VSD integration
deseq2 ruvseq continuous covariates vsd written 20 months ago by Mattia10 • updated 20 months ago by Michael Love14k
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