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Comment: DESeq2: thousands of NA for pvalues?
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California Business Journal
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California Business Journal is a leading [business journal][1] that publishes inspiring stories and valuable insights for entrepreneurs and…
Comment: Differential expression of proteins using somascan data
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Hohalen
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Ensure that the row names of protein_data_log2 (if any) are not causing confusion
*Edited by [slope game][1] 1 day ago*
[1]: https://s…
Answer: Differential expression of proteins using somascan data
by
James W. MacDonald
68k
Providing a bunch of code but not the output is not very helpful. Ideally you would just provide
```
nrow(design)
ncol(protein_data_lo…
Comment: Surprising behavior for DEXseq dispersion estimate plot?
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Elijah
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0
Hi Snow,
Thanks for your comment! I didn't do any normalization of the counts prior to the DEXseq pipeline - I've only been using the inte…
Comment: Using tximport for kallisto aligned TOIL data
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Nicholas
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0
Sorry, I misspoke. The data was from the TOIL project and was aligned using kallisto. It was accessed from the UCSC XENA browser. I updated…
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