Showing: tximportreset
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Normalizing counts using TIN metric before DESeq2
deseq2 salmon tximport written 2 days ago by hsbio0 • updated 2 days ago by Michael Love25k
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81
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2
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76
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RNA-seq with Salmon and tximport
rna-seq salmon tximport written 23 days ago by woojoy140 • updated 23 days ago by James W. MacDonald51k
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92
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tximport query for un-normalized and TPM data
tximport written 5 weeks ago by HKS0 • updated 5 weeks ago by Michael Love25k
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125
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tximport not working on tsv files
tximport written 6 weeks ago by HKS0
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114
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96
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windows tximport fail
rhdf5 tximport written 6 weeks ago by rhart0 • updated 6 weeks ago by Michael Love25k
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133
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1
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1
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173
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73
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tximport in DESeq2 problem
tximport written 10 weeks ago by abskumar0 • updated 10 weeks ago by Michael Love25k
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112
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97
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86
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1
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78
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tximport from Galaxy output
normalization tximport written 3 months ago by agustin.gonvi10 • updated 3 months ago by Michael Love25k
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106
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Importing Salmon counts with tximport with host and virus genomes
salmon tximport written 3 months ago by rbenel0 • updated 3 months ago by Michael Love25k
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140
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tximport discrepancy between TPMs and lengthScaledTPMs
tximport written 3 months ago by igor30 • updated 3 months ago by Michael Love25k
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76
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inferential replicates in Kallisto when summarising values via tximport
tximport written 3 months ago by Mozart10 • updated 3 months ago by Michael Love25k
2
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206
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Importing transcript abundance datasets generated with Salmon 0.14.0
tximport written 3 months ago by edoardobertolini0 • updated 3 months ago by Michael Love25k
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147
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how to set offset matrix to Deseq2 differential analysis
deseq2 tximport kallisto written 3 months ago by qwzhang06010 • updated 3 months ago by Michael Love25k
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118
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Salmon / tximport
deseq2 tximport written 3 months ago by polaxgr10 • updated 3 months ago by Michael Love25k
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148
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Correlation of gene expression values using tpms and normalized counts
deseq2 tximport written 4 months ago by taliaferrojm0 • updated 4 months ago by Michael Love25k
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270
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Correct use of tximport in combination with edgeR cpm()
edger tximport written 4 months ago by ATpoint20 • updated 4 months ago by James W. MacDonald51k
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119
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Tximport and pseudo alignment with Kallisto
deseq2 tximport kallisto written 4 months ago by Mozart10 • updated 4 months ago by Michael Love25k
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96
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Robust FPM with normalization factors (from tximport)?
normalization deseq2 tximport written 4 months ago by Roger0 • updated 4 months ago by Michael Love25k
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115
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output of the function "makeCountsFromAbundance"
tximport written 4 months ago by capricygcapricyg0 • updated 4 months ago by James W. MacDonald51k
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