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Comment: DESeq2: Gene is DEG in one experiment but not in the other depite similar baseMe
by
txema.heredia
• 0
You could check the reply I got to a similar issue here: https://support.bioconductor.org/p/9160134/ In short, DESeq2 uses by default `ind…
Comment: EuroBioC2024 abstract submission is open!
by
Jessica
• 0
Mixing it up with a bunch of categories like short talks, presentation packs, posters, and contribution sessions makes sharing research and…
Comment: Can we get beta values with DMRcate package
by
Melisa Tecik
• 0
When I updated, the problem was solved. I used the getCollapsedBetas function. My EPIC array data is the original one, so I'll stick with…
Comment: Advice needed: Using limma for differential pathway analysis with continuous dis
by
Tadeoye
▴ 20
Thank you so much for the clarification!
Comment: Rsubread - Error on buildindex - big ref sequence
by
bryan.penning
• 0
That is most unfortunate. I truly believe subread would be a superior aligner for complex plant genomes, especially in terms of accuracy. T…
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Comment: What type of counts data to import for performing Isoform analysis in edgeR
A: Relations used in GO.db GOBPANCESTOR
Relations used in GO.db GOBPANCESTOR
Answer: RSubread output significantly different from bash Subread output
Answer: RSubread output significantly different from bash Subread output
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