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Comment: GO enrichment analysis on Solanum lycopersicum proteomics dataset (UniProt IDs) by Guido Hooiveld ★ 3.0k

That should be: http://ftp.ebi.ac.uk/pub/databases/GO/goa/proteomes/4378222.W_seafood_market_pneumonia_virus_1.goa. Found through the GOA…

Answer: Ensuring reproducibility in BiocParallel SingleCellExperiment workflows by Aaron Lun ★ 27k

I don't think that setting `RNGseed` inside `MulticoreParam` does what anyone really expects. See the discussion in https://github.com/Bioc…

Comment: BLAST-like alignment of a DNAString to a BSgenome? by Charles Plessy ▴ 130

Thanks Hervé. `annotate::blastSequences()` sends jobs to the NCBI server, so that is not exactly what I was looking for. I searched again …

Comment: TCL/TK in R by Bogdan ▴ 620

Thank you Mike. On my Ubuntu machine, before compiling R, I had tcl-dev and tk-dev already at the latest version. *tk-dev is already the …

Comment: TCL/TK in R by Mike Smith ★ 5.2k

Are you compiling R from source, or installing from the Ubuntu repositories via `apt-get install` ? I think the output of `capabilities()`…

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Answer: Error arrayQualityMetrics

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