Recent ...
Replies
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
by
snijesh
▴
200
I would like to clarify whether the command
`res <- results(dds, name = "phaseLP.conditionTreated")`
is the correct approach to generate …
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
by
James W. MacDonald
68k
Not sure I understand. You ask how to do something and then show how one would do so.
Comment: DiffBind getting Fold values of near 0
by
littlefishes20
▴
10
Same issues. All peaks return to a fold near 0, although they are significant when visualizing in IGV. Please find the MAplot and volcanoPl…
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
by
snijesh
▴
200
I have checked DEGs between Solvent Control (SC) of FP and LP and there are noticebale differences in terms of DEGs.
```
# Checking SC in …
Answer: A0A287BB68 not recognized as UNPROT key in org.Ss.eg.db using AnnotationDbi::sel
by
James W. MacDonald
68k
Apparently it's been over-ridden by a different UniProtKB ID
```
> select(org.Ss.eg.db, "MYH11", "UNIPROT", "SYMBOL")
'select()' retu…
Votes
Awards
• All
Popular Question to
Robert Castelo
★
3.4k
Popular Question to
Gordon Smyth
52k
Popular Question to
littlefishes20
▴
10
Popular Question to
Dario Strbenac
★
1.6k
Popular Question to
shepherl
4.2k
Locations
• All
United States, 41 minutes ago
Seattle, WA, United States, 48 minutes ago
The city by the bay, 1 hour ago
Pittsburgh, United States, 3 hours ago
WEHI, Melbourne, Australia, 4 hours ago
United States, 41 minutes ago
Seattle, WA, United States, 48 minutes ago
The city by the bay, 1 hour ago
Pittsburgh, United States, 3 hours ago
WEHI, Melbourne, Australia, 4 hours ago
Traffic: 824 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6