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Answer: I got error message about DESeqDataSetFromMatrix
by
swbarnes2
★
1.1k
Did you do
`library(DESeq2)`
first? That's the error you get when the software has no idea what function you are referring to, beca…
Comment: miRNA differential expression analysis - treat as transcript level?
by
Michael Love
37k
This is very low and I think you can just use regular count-based methods safely. If you look at the ~3 features above 1 those are probably…
Comment: LogFC: how do you determine the cutoff for differentially expressed genes?
by
OE
•
0
Hi Aaron, I have been performing some Diffrential Methylation Analysis and found some logFC values really closer to 0 ( from - 0.07 to 0.1…
Comment: Macbook M1 install genefilter failed
by
matt.broerman
•
0
This error is similar to this one: https://stackoverflow.com/questions/66817276/how-to-install-rcpparmadillo-on-apple-silicon-m1-macs
So i…
Comment: miRNA differential expression analysis - treat as transcript level?
by
BG
•
0
Hi, attached is the plot for the inferential variance (code according to the fishpond vignette). How does this look to you? The first plot …
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