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Comment: Gene Set Enrichment Analysis in Bioconductor course
by
info
▴ 10
If you are interested in Gene Set Enrichment Analysis in R, you can still join us next week for this 4-day Physalia course on GSEA in R and…
Comment: cannot download atena annotation for human
by
Davide
• 0
That's the error that comes up: > rmskann <- atena::annotaTEs(genome = "hg38", parsefun = "rmskbasicparser") Connecting to the Ann…
Comment: DiffBind edgeR normalization --- why are the normalization factors all equal to
by
tifaGis
• 0
Hi, thanks for your response. I'd like to know why > You perform library normalization which is expected to return > normalization fact…
Answer: orgDB
by
shepherl
4.1k
You can check the AnnotationHub to see if there are any existing. Otherwise you can check out the AnnotationForge package for creating your…
Answer: GSVA Error Code "Calling gsva(expr=., gset.idx.list=., method=., ...) is defunct
by
ATpoint
★ 4.7k
Please go through the current vignette to learn about the syntax and functions. There were quite drastic changes recently, so older code wi…
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Answer: Vertical line at A=0, nothing else, on MA plot
Answer: GSVA Error Code "Calling gsva(expr=., gset.idx.list=., method=., ...) is defunct
Answer: Group-specific condition effects with individuals nested: matrix is not full ra
Answer: Group-specific condition effects with individuals nested: matrix is not full ra
C: Vertical line at A=0, nothing else, on MA plot
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