Bioconductor Fella

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FELLA

19 months ago yuhang • 0

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FELLA

19 months ago yuhang • 0

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FELLA

4.0 years ago sergi.picart ▴ 20

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fella

updated 4.0 years ago by sergi.picart ▴ 20 • written 6.6 years ago by cecilia.chiriac • 0

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fella software error

5.8 years ago sergi.picart ▴ 20

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FELLA software error

6.0 years ago sergi.picart ▴ 20

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software error FELLA

updated 6.8 years ago by sergi.picart ▴ 20 • written 6.8 years ago by jnzd_hemaozhang • 0

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Comment: gene Set with high AUC score but no cells assigned to cell type by eja.hdrer33ge.r.m • 0

Understanding complex data results like those from AUCell can be challenging. For easier analysis and better data management on the go you …

Comment: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames by ubjw24 • 0

Thank you for your replies. I got the problem solved by installing mutSignature with this line: ``` devtools::install_github("dami82/mutS…

Comment: DESeq2 design for haplotype MPRA by Rita • 0

Thank you very much, I appreciate it!

Answer: DESeq2 design for haplotype MPRA by Michael Love 43k

> My goal is to identify which non-reference haplotypes are differentially active compared to the corresponding ref/ref haplotype within ea…

Answer: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames by James W. MacDonald 68k

It seems fine on devel as well. ``` > BSgenome.Hsapiens.UCSC.hg38 | BSgenome object for Human | - organism: Homo sapiens | - provide…

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Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?

Answer: DESeq2 design for haplotype MPRA

A: Different logFC (log2foldchange) values for genes from limma-voom and other too

Comment: Check removeBatchEffect effectiveness

Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)

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