Bioconductor

No posts found.

0 results • Page 1 of 1

Recent ...

Replies

Comment: DiffBind: dba.plotProfile(profiles) by Rory Stark ★ 5.0k

Yes, setting `raster_quality` down is a good way to address this issue. I've taken to using `raster_quality=1` in general as I think the pl…

Comment: DiffBind: dba.plotProfile(profiles) by Dorien ▴ 10

Not really an answer as I don't know really know why , but I also had the same issue and may have found a workaround ! If I set maxSites > …

Comment: Suggested package missing from Development version of Bioconductor by shepherl 3.5k

Is your package in review or already in Bioconductor? Its harder if it is in review because we can't tell that the package has or can build…

Comment: biomaRt code/getBM function no longer importing 'coding' sequence via seqType ar by andrew.b.kleist • 0

This worked perfectly! I was able to retrieve the sequences of interest using ```host="https://grch37.ensembl.org"``` within the useEnsembl…

Comment: Using edgeR and a spike-in to calculate absolute abundance by Miguel • 0

I have the same issue. As far as I understand, many of the approximations to compute differential abundances include normalization steps wh…

Votes

Comment: DiffBind: dba.plotProfile(profiles)

Normalisation of data using DESeq2 with multi-groups

Awards • All