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Comment: GAlignments Cigar to GRanges by pineiroalejandro • 0
Wow, so easy! Thanks for your quick reply.
Comment: EuroBioC2023 abstract submission is open! by eilishhill8 • 0
Thanks for sharing this. I got it clearly now. Submit here: [https://openreview.net/group?id=bioconductor.org/EuroBioC/2023/][1] [melon sa…
Comment: European Bioconductor Conference 2023 planning by rasafreelancer • 0
@[chill guy clicker][1] Sounds like a fantastic opportunity! I'm really curious about the emerging technologies that will be highlighted at…
Answer: How to extract coordinates of mismatches from a BAM file lodaded in as a GAlignm by Hervé Pagès 16k
This should be fast: ```r library(GenomicAlignments) extractMismatchesFromGAlignments <- function(ga) { stopifnot(is(ga, "GAlign…
Answer: GAlignments Cigar to GRanges by Hervé Pagès 16k
```r > as(gal, "GRangesList") GRangesList object of length 2: [[1]] GRanges object with 2 ranges and 0 metadata columns: seqnames …
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Answer: GAlignments Cigar to GRanges
Answer: GAlignments Cigar to GRanges
When running contrasts, does it use normalized read counts?
When running contrasts, does it use normalized read counts?
Importing Salmon counts with tximport with host and virus genomes
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