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Comment: bug in block.plsda from mixOmics?
by
James W. MacDonald
63k
But `block.plsda` calls `internal_wrapper.mint.block` with DA = TRUE, so the default doesn't matter. You'll need to provide the output from…
Answer: Extract LRT results for each comparison
by
ATpoint
★
3.4k
1) The design does not impact the PCA. If you want to see effects on adding or removing design covariates then you have to regress the cova…
Comment: Interpretation of LRT results
by
Yijing
•
0
Hello James,
In my case, I have 3 timepoints that I want to compare timepoint 1 vs. timepoint 0 and timepoint 2 vs. timepoint 0.
I tried …
Answer: Problems with FLOWAI
by
SHASHI
•
0
Additionally, if you're looking to clean FCS data files, you can utilize an R script. I've prepared a comprehensive YouTube tutorial to aid…
Answer: Is SeqSQC compatible with hg38?
by
James W. MacDonald
63k
I'll answer your question with a question. Is there any reason to believe that things like IBD or PCA or Sex checks would be dependent on t…
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