Biostar Varianttoolsdata

Showing : varianttoolsdata • reset

2

votes

1

reply

92

views

varian VariantToolsData

updated 28 days ago by James W. MacDonald 60k • written 4 weeks ago by Ahdee ▴ 50

1 result • Page 1 of 1

Recent ...

Replies

Comment: rename phenotypic variables in pData (microarray) or colData (RNA-Seq) by Basti ▴ 330

Could you share an example of your dataset( `dput(...)`) ? I tried with a random ExpressionSet and `names(p(Data(dataset))[1] <- "New_VAR"`…

Comment: rename phenotypic variables in pData (microarray) or colData (RNA-Seq) by jogugil • 0

names(pData(microarray))[1]<- "NEW_VAR" It doesn't work, it gives the following error: invalid (NULL) left side of assignment you canno…

Answer: Can't Install ensembldb and EnsDb.Hsapiens.v86 by elmfinds • 0

Thank you mbk0asis and Johannes! Installing png solved my issue. I appreciate your help!

Comment: Combine GRanges(List) to a single GRanges with unified breakpoints by Rodrigo • 0

Hi @malcolm-cook-6293 , Thanks again for the help. The code got me started albeit, I changed a bit the handling of the metadata. ``` #'…

Comment: how to get the gene set from online GO database by pengmin.wang.1 • 0

thank you for your information. But I can't run this: ```{r} hub <- AnnotationHub() ``` Error in UseMethod("filter_") : no applicable me…

Votes

Awards • All

Popular Question to hamza_karakurt ▴ 50

Popular Question to xiaofeiwang18266 ▴ 40

Scholar to Malcolm Cook ★ 1.6k