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Comment: Module membership vs gene significance result and Modules-trait relationships re by annamariabugaj ▴ 10
similar problem here, my detailed question is here: https://support.bioconductor.org/p/133024/#9144455
Comment: Calculation of module membership in WGCNA by annamariabugaj ▴ 10
I have a question regarding the Gene Significance since I am very confused with my results. In the module-trait correlation heatmap, the …
Comment: regression analysis for epic array methylation data using limma by Basti ▴ 280
Your DMPs can be accessed with topTable function : `DMPs <- topTable(fit2, coef=2)`, then you can filter the DMPs by adjusted P-val
Answer: Can GSVA be applied in several sample type and each type only have two replicate by Robert Castelo ★ 2.9k
Dear Guandong, sorry for the very late reply to your post, I somehow overlooked it. The non-parametric density estimation is made using …
Comment: Question on RNA-Seq single sample data analysis in EdgeR by Gordon Smyth 45k
You questions are answered by the edgeR documentation. I thought from your question that you already understood that you have no replicati…
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Comment: Question on RNA-Seq single sample data analysis in EdgeR
Answer: Question on RNA-Seq single sample data analysis in EdgeR
Answer: Question on RNA-Seq single sample data analysis in EdgeR
Answer: How to run GSVA with partially NA genes
Answer: How to run GSVA with partially NA genes
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Centurion to Basti ▴ 280
Scholar to Robert Castelo ★ 2.9k
Scholar to Gordon Smyth 45k
Popular Question to andrebolerbarros ▴ 10
Scholar to James W. MacDonald 59k
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