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DESeq2 and fdrtool: applying FDR correction when the empirical sigma is greater than 1
deseq2 fdrtool
updated 9.3 years ago by ▴ 610 • written 9.3 years ago by ▴ 60
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Comment: C: High number of significant DE genes with low baseMean, is this abnormal?
9.5 years ago dhibar ▴ 60
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High number of significant DE genes with low baseMean, is this abnormal?
deseq2
updated 9.5 years ago by ★ 7.9k • written 9.5 years ago by ▴ 60
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Comment: C: Possible to incorporate the sign or direction of an effect in the IHW covariate?
9.5 years ago dhibar ▴ 60
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Possible to incorporate the sign or direction of an effect in the IHW covariate?
IHW
updated 9.5 years ago by ▴ 180 • written 9.5 years ago by ▴ 60
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