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Comment: C: Are interaction terms symetrical with regard to the designation of main and seco
7.0 years ago kieran.mace ▴ 40
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Is there a conceptual difference between vst/rlog transforms and lfcShrink?
deseq2
updated 7.0 years ago by 43k • written 7.0 years ago by ▴ 40
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Comment: C: log fold change threshold in Deseq2 - using lfcthreshold
7.0 years ago kieran.mace ▴ 40
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Answer: A: Are interaction terms symetrical with regard to the designation of main and seco
7.0 years ago kieran.mace ▴ 40
0
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5
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931
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Are interaction terms symetrical with regard to the designation of main and secondary effect?
deseq2
7.0 years ago kieran.mace ▴ 40
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0
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931
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Comment: C: Are interaction terms symetrical with regard to the designation of main and seco
7.0 years ago kieran.mace ▴ 40
0
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1
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820
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Multiple tests in a single deseq object
deseq2
updated 7.0 years ago by ★ 13k • written 7.0 years ago by ▴ 40
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0
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644
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Comment: C: coef funcition execept for pvalues
7.0 years ago kieran.mace ▴ 40
1
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2
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644
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coef funcition execept for pvalues
deseq2
updated 7.1 years ago by 43k • written 7.1 years ago by ▴ 40
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1.2k
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Answer: A: Supplying a designmatrix to DESeq()
7.1 years ago kieran.mace ▴ 40
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3
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1.2k
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Supplying a designmatrix to DESeq()
deseq2
7.1 years ago kieran.mace ▴ 40
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0
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1.2k
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Comment: C: Supplying a designmatrix to DESeq()
7.1 years ago kieran.mace ▴ 40
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0
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1.1k
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Comment: C: Lasso in DESeq2
7.2 years ago kieran.mace ▴ 40
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2
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1.1k
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Lasso in DESeq2
deseq2
updated 7.2 years ago by 43k • written 7.2 years ago by ▴ 40
2
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1
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761
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Can I run DESeq2, if I have repeats for my control, but no repeats for my test condition?
deseq2
updated 8.1 years ago by 43k • written 8.1 years ago by ▴ 40
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