Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : all
1
vote
0
replies
241
views
Comment: Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
2 days ago ATpoint ★ 4.1k
0
votes
1
reply
241
views
Comment: Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
2 days ago ATpoint ★ 4.1k
1
vote
1
reply
241
views
Comment: Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
2 days ago ATpoint ★ 4.1k
0
votes
1
reply
95
views
Comment: Comment: Problem installing ChAMP on a MacBook
2 days ago ATpoint ★ 4.1k
1
vote
0
replies
117
views
Comment: Comment: How to correctly adjust for gender in edgeR
3 days ago ATpoint ★ 4.1k
1
vote
1
reply
241
views
Comment: Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
3 days ago ATpoint ★ 4.1k
0
votes
0
replies
165
views
Answer: Answer: Differential gene expression analysis results
8 days ago ATpoint ★ 4.1k
0
votes
0
replies
101
views
Answer: Answer: normalization using Deseq2
9 days ago ATpoint ★ 4.1k
0
votes
1
reply
375
views
Comment: Comment: deseq2 results
10 days ago ATpoint ★ 4.1k
0
votes
1
reply
447
views
Comment: Comment: Extremely small p-values using Limma for proteomic data
10 days ago ATpoint ★ 4.1k
0
votes
0
replies
304
views
Comment: Comment: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
10 days ago ATpoint ★ 4.1k
0
votes
1
reply
447
views
Comment: Comment: Extremely small p-values using Limma for proteomic data
10 days ago ATpoint ★ 4.1k
0
votes
0
replies
220
views
Comment: Comment: Couldn't connect to server while using "pathways"
12 days ago ATpoint ★ 4.1k
0
votes
0
replies
254
views
Comment: Comment: Too many significant genes when integrating gtex and tcga
13 days ago ATpoint ★ 4.1k
2
votes
1
reply
224
views
Answer: Answer: fgsea significant result
13 days ago ATpoint ★ 4.1k
0
votes
0
replies
222
views
Comment: Comment: Differences in differential analysis methods for RNA-Seq
16 days ago ATpoint ★ 4.1k
0
votes
1
reply
210
views
Answer: Answer: Deseq2 and Normalization of RNA sequencing data
16 days ago ATpoint ★ 4.1k
0
votes
1
reply
222
views
Comment: Comment: Differences in differential analysis methods for RNA-Seq
16 days ago ATpoint ★ 4.1k
1
vote
1
reply
304
views
Answer: Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
16 days ago ATpoint ★ 4.1k
0
votes
0
replies
135
views
Answer: Answer: putting my own expression data in deseq2
18 days ago ATpoint ★ 4.1k
1
vote
0
replies
269
views
Comment: Comment: DESeq2: Contrast for two conditions combined versus one condition (A+B_vs_C)
19 days ago ATpoint ★ 4.1k
2
votes
1
reply
269
views
Answer: Answer: DESeq2: Contrast for two conditions combined versus one condition (A+B_vs_C)
19 days ago ATpoint ★ 4.1k
0
votes
0
replies
170
views
Answer: Answer: ATACseq merge peaks
22 days ago ATpoint ★ 4.1k
0
votes
0
replies
253
views
Comment: Comment: Deseq2. decontXcounts not integers. Useful alternative?
22 days ago ATpoint ★ 4.1k
0
votes
0
replies
175
views
Comment: Comment: Reproducibility issue with scran together with lapply and BiocParallel
23 days ago ATpoint ★ 4.1k
1
vote
2
replies
175
views
Reproducibility issue with scran together with lapply and BiocParallel
scran BiocParallel bluster
24 days ago • updated 23 days ago ATpoint ★ 4.1k
0
votes
1
reply
265
views
Comment: Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge
24 days ago ATpoint ★ 4.1k
0
votes
1
reply
235
views
Answer: Answer: Different Shrunk Log2FC according with reference
24 days ago ATpoint ★ 4.1k
0
votes
1
reply
385
views
Comment: Comment: DESeq2 output used for PCA plot on R studio
24 days ago ATpoint ★ 4.1k
2
votes
1
reply
1.3k
views
Answer: Answer: Why p value inconsistent when using different number of pathway score?
28 days ago ATpoint ★ 4.1k
0
votes
1
reply
265
views
Comment: Comment: Differential peaks that were not identified in diffbind were identified in diseq
29 days ago ATpoint ★ 4.1k
0
votes
1
reply
265
views
Comment: Comment: Differential peaks that were not identified in diffbind were identified in diseq
29 days ago ATpoint ★ 4.1k
0
votes
0
replies
112
views
Comment: Comment: Input Question for deseq.r
4 weeks ago ATpoint ★ 4.1k
0
votes
0
replies
167
views
Answer: Answer: DESEQ2 output gives multiple groups when only 2 groups are present
4 weeks ago ATpoint ★ 4.1k
0
votes
0
replies
145
views
Comment: Comment: Deseq2 Rlog transformation
4 weeks ago ATpoint ★ 4.1k
0
votes
1
reply
283
views
Comment: Comment: A ComBat-seq issue: the covariates are confounded
4 weeks ago ATpoint ★ 4.1k
1
vote
0
replies
457
views
Comment: Comment: Not fully paired differential gene expression analysis
5 weeks ago ATpoint ★ 4.1k
1
vote
1
reply
191
views
Comment: Comment: [DiffBind] Obtaining normalization factors
5 weeks ago ATpoint ★ 4.1k
1
vote
1
reply
306
views
Comment: Comment: Surrogate variable analysis for paired RNA seq experiment
5 weeks ago ATpoint ★ 4.1k
1
vote
1
reply
306
views
Comment: Comment: Surrogate variable analysis for paired RNA seq experiment
5 weeks ago ATpoint ★ 4.1k
1
vote
1
reply
306
views
Comment: Comment: Surrogate variable analysis for paired RNA seq experiment
5 weeks ago ATpoint ★ 4.1k
0
votes
0
replies
154
views
Answer: Answer: Can you find the correct transcript in scRNA seq data
5 weeks ago ATpoint ★ 4.1k
1
vote
0
replies
457
views
Comment: Comment: Not fully paired differential gene expression analysis
5 weeks ago ATpoint ★ 4.1k
0
votes
0
replies
219
views
Comment: Comment: Bluster and Varieties of Louvain Clulstering
6 weeks ago ATpoint ★ 4.1k
0
votes
0
replies
375
views
Comment: Comment: PCA of different bacterial species
7 weeks ago ATpoint ★ 4.1k
2
votes
0
replies
254
views
Answer: Answer: Existence of Bioconductor versus Seurat Software Ecosystems Quantitative Compari
7 weeks ago ATpoint ★ 4.1k
0
votes
1
reply
313
views
Comment: Comment: EDAseq to normalise for both gene-length and GC-content
8 weeks ago ATpoint ★ 4.1k
0
votes
1
reply
313
views
Comment: Comment: EDAseq to normalise for both gene-length and GC-content
8 weeks ago ATpoint ★ 4.1k
1
vote
0
replies
306
views
Comment: Comment: Extracting genomic sequences using agat and bedtools yields different results
8 weeks ago ATpoint ★ 4.1k
0
votes
0
replies
285
views
Comment: Comment: Help with Complex DESeq2 Design
8 weeks ago ATpoint ★ 4.1k
914 results • Page 1 of 19
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6