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Answer: Answer: ATACseq rudimentary questions
26 days ago Kevin Blighe ★ 4.0k
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2
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2.0k
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Answer: Answer: How can I correctly use phyloseq with Docker?
9 weeks ago Kevin Blighe ★ 4.0k
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525
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Answer: Answer: Boolean Gate Combination for Any 2 Positive Events in flowWorkspace
9 weeks ago Kevin Blighe ★ 4.0k
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462
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Answer: Answer: Guidance Requested on GCN Network Analysis and Module Enrichment in R
9 weeks ago Kevin Blighe ★ 4.0k
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475
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Answer: Answer: ORFik: spliced 5utr regions
9 weeks ago Kevin Blighe ★ 4.0k
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1
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434
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Answer: Answer: Results with PON give more variants
9 weeks ago Kevin Blighe ★ 4.0k
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1
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418
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Answer: Answer: Empty boxes in treemap plot rrvgo package
9 weeks ago Kevin Blighe ★ 4.0k
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344
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Answer: Answer: CRISPRSeek Question: changing weight and gRNA.size causes error
9 weeks ago Kevin Blighe ★ 4.0k
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609
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Answer: Answer: Feedback needed on new user-friendly BED file tool
9 weeks ago Kevin Blighe ★ 4.0k
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326
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Answer: Answer: sigDF object in sesame
9 weeks ago Kevin Blighe ★ 4.0k
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447
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Answer: Answer: Create consensusMatrix for codon bases
9 weeks ago Kevin Blighe ★ 4.0k
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510
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Answer: Answer: Memory error while running alignments
9 weeks ago Kevin Blighe ★ 4.0k
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2.2k
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Answer: Answer: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
9 weeks ago Kevin Blighe ★ 4.0k
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352
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Answer: Answer: Finding duplicated entries in GRangesList
9 weeks ago Kevin Blighe ★ 4.0k
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1
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371
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Answer: Answer: DESeq2 on non-RNASeq counts data
9 weeks ago Kevin Blighe ★ 4.0k
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1
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533
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Answer: Answer: After running samtools, the featureCounts command crashed.
9 weeks ago Kevin Blighe ★ 4.0k
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1
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652
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Answer: Answer: Problem with the TMB plot
9 weeks ago Kevin Blighe ★ 4.0k
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1
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1.0k
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Answer: Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
9 weeks ago Kevin Blighe ★ 4.0k
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405
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Answer: Answer: Extract snp information from genomic regions with biomaRt -> "oaries_snp"
10 weeks ago Kevin Blighe ★ 4.0k
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319
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Answer: Answer: Questions about pseudo counts from RUVSeq
10 weeks ago Kevin Blighe ★ 4.0k
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185
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Comment: Comment: APAlyzer
10 weeks ago Kevin Blighe ★ 4.0k
1
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0
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665
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Answer: Answer: gene Set with high AUC score but no cells assigned to cell type
11 weeks ago Kevin Blighe ★ 4.0k
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374
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Answer: Answer: featureCounts -L: high unassigned:mapq fraction
11 weeks ago Kevin Blighe ★ 4.0k
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493
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Answer: Answer: Streamlining the computing time for MiloDE p-value correction in large dataset?
11 weeks ago Kevin Blighe ★ 4.0k
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485
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Answer: Answer: incomplete imputation of missing values with LEA impute() function
11 weeks ago Kevin Blighe ★ 4.0k
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0
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850
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Answer: Answer: A problem occurs when running the monocle2
11 weeks ago Kevin Blighe ★ 4.0k
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1
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626
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Answer: Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
11 weeks ago Kevin Blighe ★ 4.0k
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1
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201
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Answer: Answer: VariantAnnotation not does escape = within header string quotes
11 weeks ago Kevin Blighe ★ 4.0k
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1
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323
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Answer: Answer: Setting up a DESeq2 Design with Paired Data
11 weeks ago Kevin Blighe ★ 4.0k
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0
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2.9k
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Comment: Comment: DESeq2 output used for PCA plot on R studio
21 months ago Kevin Blighe ★ 4.0k
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1
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2.4k
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Answer: Answer: Difference between vst() and varianceStabilizingTransform()
2.1 years ago Kevin Blighe ★ 4.0k
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0
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2.8k
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Comment: Comment: scRNA-seq as pseudobulk for DEseq2: does AggregateExpression() normalize counts?
2.1 years ago Kevin Blighe ★ 4.0k
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1
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4.0k
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Comment: Comment: DESeq2 - groups with biological replicates from the same patient
updated 2.0 years ago by 4.3k • written 2.2 years ago by ★ 4.0k
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4.0k
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Comment: Comment: DESeq2 - groups with biological replicates from the same patient
2.2 years ago Kevin Blighe ★ 4.0k
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2
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4.0k
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Comment: Comment: DESeq2 - groups with biological replicates from the same patient
2.2 years ago Kevin Blighe ★ 4.0k
0
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1
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4.0k
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Comment: Comment: DESeq2 - groups with biological replicates from the same patient
2.2 years ago Kevin Blighe ★ 4.0k
0
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1
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2.7k
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Comment: Comment: Ensembl down???
2.2 years ago Kevin Blighe ★ 4.0k
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0
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3.8k
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Comment: Comment: tximport error: vroom
2.3 years ago Kevin Blighe ★ 4.0k
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0
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3.5k
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Comment: Comment: PCA percent variance DESeq2
2.4 years ago Kevin Blighe ★ 4.0k
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0
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666
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Answer: Answer: DEG by deseq2 by Race
2.5 years ago Kevin Blighe ★ 4.0k
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0
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1.2k
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Comment: Comment: affy package and SNP arrays
2.6 years ago Kevin Blighe ★ 4.0k
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1
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2.4k
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Answer: Answer: enhanced volcano , different -log10pvalue of the same gene
2.7 years ago Kevin Blighe ★ 4.0k
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0
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3.8k
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Comment: Comment: EnhancedVolcano - Unable to customize the length of Connectors to Gene Labels
2.8 years ago Kevin Blighe ★ 4.0k
1
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1
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3.8k
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Comment: Comment: EnhancedVolcano - Unable to customize the length of Connectors to Gene Labels
2.8 years ago Kevin Blighe ★ 4.0k
1
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1
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3.8k
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Answer: Answer: EnhancedVolcano - Unable to customize the length of Connectors to Gene Labels
2.8 years ago Kevin Blighe ★ 4.0k
0
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0
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1.2k
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Comment: Comment: How to import dataset from other software into DESeq2?
2.8 years ago Kevin Blighe ★ 4.0k
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0
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6.4k
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Comment: Comment: How to change the dot size in plotPCA?
2.9 years ago Kevin Blighe ★ 4.0k
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0
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967
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Comment: Comment: Microarray Data - Matching Probe ID's to Gene Expression Symbols
2.9 years ago Kevin Blighe ★ 4.0k
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0
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1.0k
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Answer: Answer: BioC packages in cancer genomics
2.9 years ago Kevin Blighe ★ 4.0k
2
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0
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2.8k
views
Answer: Answer: Overlay points with EnhancedVolcano R
2.9 years ago Kevin Blighe ★ 4.0k
918 results • Page 1 of 19
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