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Comment: Comment: different sample size from each individual
2.6 years ago Kevin Blighe ★ 4.0k
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1.3k
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Comment: Comment: How to properly use DESeq2 for an experiment
2.6 years ago Kevin Blighe ★ 4.0k
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1
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11k
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Comment: Comment: is it possible to use TPM in DESeq2 ?
2.6 years ago Kevin Blighe ★ 4.0k
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11k
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Answer: Answer: is it possible to use TPM in DESeq2 ?
2.6 years ago Kevin Blighe ★ 4.0k
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1.8k
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Comment: Comment: How to run vst transformation
2.6 years ago Kevin Blighe ★ 4.0k
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2.2k
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Answer: Answer: DESeq2- how to remove NA values
2.6 years ago Kevin Blighe ★ 4.0k
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679
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Answer: Answer: Volcano plots
2.6 years ago Kevin Blighe ★ 4.0k
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723
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Comment: Comment: Student
2.6 years ago Kevin Blighe ★ 4.0k
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2.4k
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Comment: Comment: GDCprepare error in TARGET-AML data access
2.6 years ago Kevin Blighe ★ 4.0k
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2.5k
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Comment: Comment: How can i download maf files form GDC Data Portal?
2.6 years ago Kevin Blighe ★ 4.0k
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2.1k
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Answer: Answer: Ensembl non responsive
2.6 years ago Kevin Blighe ★ 4.0k
1
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1.9k
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Answer: Answer: How to open up a zip file?
2.6 years ago Kevin Blighe ★ 4.0k
0
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0
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733
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Comment: Comment: apt-format-result, where is the --annotation-file?
2.7 years ago Kevin Blighe ★ 4.0k
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1
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2.5k
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Comment: Comment: Problem with fgsea
2.7 years ago Kevin Blighe ★ 4.0k
0
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0
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3.3k
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Comment: Comment: How to get the rsID of 4 million SNPA
2.8 years ago Kevin Blighe ★ 4.0k
0
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0
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1.5k
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Comment: Comment: How to do functional analysis on differentially expressed gene list from RNA-seq
2.8 years ago Kevin Blighe ★ 4.0k
0
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1
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1.9k
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Comment: Comment: Issue with selectively labelling genes in the Enhanced Volcano package
2.9 years ago Kevin Blighe ★ 4.0k
0
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1
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1.9k
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Answer: Answer: Issue with selectively labelling genes in the Enhanced Volcano package
2.9 years ago Kevin Blighe ★ 4.0k
1
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0
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1.5k
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Comment: Comment: Bioconductor-RipSeeker
2.9 years ago Kevin Blighe ★ 4.0k
0
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0
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944
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Comment: Comment: Ensembl REST API Endpoints
2.9 years ago Kevin Blighe ★ 4.0k
0
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1.1k
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Comment: Comment: Unable to label in Enhanced Volcano
2.9 years ago Kevin Blighe ★ 4.0k
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0
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2.3k
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Comment: Comment: Enhancedvolcano labels superimposed on points
2.9 years ago Kevin Blighe ★ 4.0k
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1
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2.3k
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Answer: Answer: Enhancedvolcano labels superimposed on points
2.9 years ago Kevin Blighe ★ 4.0k
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0
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4.9k
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Comment: Comment: Deseq2 normalization for WGCNA
2.9 years ago Kevin Blighe ★ 4.0k
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1
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1.5k
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Answer: Answer: 95% confidence intervals for PCA in DESEQ2
3.0 years ago Kevin Blighe ★ 4.0k
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0
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824
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Comment: Comment: Meta analysis
3.1 years ago Kevin Blighe ★ 4.0k
0
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1
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964
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Comment: Comment: R/Bioconductor package for Circulating Cell-Free DNA data analysis
3.1 years ago Kevin Blighe ★ 4.0k
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0
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2.0k
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Comment: Comment: ERROR installing EnhancedVolcano in R4.1
3.1 years ago Kevin Blighe ★ 4.0k
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0
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1.3k
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Comment: Comment: error in champ.norm
3.2 years ago Kevin Blighe ★ 4.0k
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0
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3.6k
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Comment: Comment: DESeq2 error in design~ code
3.2 years ago Kevin Blighe ★ 4.0k
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0
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2.3k
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Comment: Comment: EnhancedVolcano plot - labels
3.2 years ago Kevin Blighe ★ 4.0k
0
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1
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2.3k
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Answer: Answer: EnhancedVolcano plot - labels
3.2 years ago Kevin Blighe ★ 4.0k
1
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0
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708
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Comment: Comment: Please merge Charles-23991 and 7857
3.2 years ago Kevin Blighe ★ 4.0k
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1
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1.4k
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Comment: Comment: LIMMA - for Microarrays?
3.3 years ago Kevin Blighe ★ 4.0k
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0
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1.7k
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Comment: Comment: pre-proccessing of TCGA data for WGCNA
3.3 years ago Kevin Blighe ★ 4.0k
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0
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1.7k
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Comment: Comment: Error message when importing my quant.sf files into R using tximport; should I s
3.3 years ago Kevin Blighe ★ 4.0k
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0
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6.3k
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Comment: Comment: ylim and xlim in Enhanced Volcano
3.3 years ago Kevin Blighe ★ 4.0k
4
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1
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6.3k
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Answer: Answer: ylim and xlim in Enhanced Volcano
3.3 years ago Kevin Blighe ★ 4.0k
0
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1
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17k
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Answer: Answer: hclust(d, method = method) : NA/NaN/Inf in foreign function call (arg 10)
3.3 years ago Kevin Blighe ★ 4.0k
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0
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3.7k
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Comment: Comment: How to count barcode sequences in a fastq file
3.3 years ago Kevin Blighe ★ 4.0k
1
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1
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1.6k
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Answer: Answer: Confused about using ComBat_seq with voom and limma? Should run batch as a cova
3.3 years ago Kevin Blighe ★ 4.0k
0
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0
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756
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Comment: Comment: PCA M3C
3.3 years ago Kevin Blighe ★ 4.0k
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0
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1.6k
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Comment: Comment: Batch-corrected expression matrix NOT on a log2 scale
3.3 years ago Kevin Blighe ★ 4.0k
0
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1
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1.6k
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Answer: Answer: Batch-corrected expression matrix NOT on a log2 scale
3.3 years ago Kevin Blighe ★ 4.0k
0
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0
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831
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Comment: Comment: question about limma removeBatchEffect and feature selection using elasticnet.
3.3 years ago Kevin Blighe ★ 4.0k
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0
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1.2k
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Comment: Comment: Normalizing 5' Nascent RNA-seq data to identify differentially expressed transcr
3.3 years ago Kevin Blighe ★ 4.0k
3
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1.0k
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Answer: Answer: Compare two samples by Deseqs
3.3 years ago Kevin Blighe ★ 4.0k
0
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1
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4.3k
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Comment: Comment: cant read celfiles using oligo package
3.3 years ago Kevin Blighe ★ 4.0k
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1
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4.3k
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Comment: Comment: cant read celfiles using oligo package
3.3 years ago Kevin Blighe ★ 4.0k
1
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1
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2.8k
views
Comment: Comment: Bootstrap value using ape package and including it in phylogenetic tree
3.3 years ago Kevin Blighe ★ 4.0k
889 results • Page 2 of 18
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