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Comment: Comment: DESeq2 output used for PCA plot on R studio
18 days ago Kevin Blighe ★ 3.9k
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363
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Comment: Comment: DESeq2 output used for PCA plot on R studio
18 days ago Kevin Blighe ★ 3.9k
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829
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Comment: Comment: scRNA-seq as pseudobulk for DEseq2: does AggregateExpression() normalize counts?
4 months ago Kevin Blighe ★ 3.9k
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2.2k
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Comment: Comment: DESeq2 - groups with biological replicates from the same patient
updated 3 months ago by 3.9k • written 5 months ago by ★ 3.9k
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2.2k
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Comment: Comment: DESeq2 - groups with biological replicates from the same patient
5 months ago Kevin Blighe ★ 3.9k
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2
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2.2k
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Comment: Comment: DESeq2 - groups with biological replicates from the same patient
5 months ago Kevin Blighe ★ 3.9k
0
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1
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2.2k
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Comment: Comment: DESeq2 - groups with biological replicates from the same patient
5 months ago Kevin Blighe ★ 3.9k
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1
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993
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Comment: Comment: Ensembl down???
5 months ago Kevin Blighe ★ 3.9k
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2.0k
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Comment: Comment: tximport error: vroom
7 months ago Kevin Blighe ★ 3.9k
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1.5k
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Comment: Comment: PCA percent variance DESeq2
8 months ago Kevin Blighe ★ 3.9k
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627
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Comment: Comment: affy package and SNP arrays
10 months ago Kevin Blighe ★ 3.9k
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1.7k
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Comment: Comment: EnhancedVolcano - Unable to customize the length of Connectors to Gene Labels
13 months ago Kevin Blighe ★ 3.9k
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1.7k
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Comment: Comment: EnhancedVolcano - Unable to customize the length of Connectors to Gene Labels
13 months ago Kevin Blighe ★ 3.9k
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690
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Comment: Comment: How to import dataset from other software into DESeq2?
13 months ago Kevin Blighe ★ 3.9k
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3.2k
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Comment: Comment: How to change the dot size in plotPCA?
13 months ago Kevin Blighe ★ 3.9k
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549
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Comment: Comment: Microarray Data - Matching Probe ID's to Gene Expression Symbols
14 months ago Kevin Blighe ★ 3.9k
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1.7k
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Comment: Comment: How can I avoid artifacts in gene set/pathway scoring by UCell and similar algor
14 months ago Kevin Blighe ★ 3.9k
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6.2k
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Comment: Comment: gene ID conversion
15 months ago Kevin Blighe ★ 3.9k
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1.2k
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Comment: Comment: Adding ellipse in PCAtools biplot
16 months ago Kevin Blighe ★ 3.9k
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722
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Comment: Comment: RNA-Seq Reads Count
18 months ago Kevin Blighe ★ 3.9k
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981
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Comment: Comment: Unable to over/ride colour scheme with custom key-value pairs
18 months ago Kevin Blighe ★ 3.9k
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1.4k
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Comment: Comment: Biostrings multiple pattern match
19 months ago Kevin Blighe ★ 3.9k
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2.5k
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Comment: Comment: biomaRt finding transcript lenghts
20 months ago Kevin Blighe ★ 3.9k
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569
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Comment: Comment: Interpret MetaVolcanoR plot
21 months ago Kevin Blighe ★ 3.9k
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1.4k
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Comment: Comment: StringTie output as Ballgown input
23 months ago Kevin Blighe ★ 3.9k
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1.3k
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Comment: Comment: I need cancer databases suggestion
23 months ago Kevin Blighe ★ 3.9k
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3.3k
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Comment: Comment: KEGG Pathway in R
23 months ago Kevin Blighe ★ 3.9k
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0
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1.3k
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Comment: Comment: Italicise
23 months ago Kevin Blighe ★ 3.9k
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1
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1.3k
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Comment: Comment: Italicise
23 months ago Kevin Blighe ★ 3.9k
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1
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1.3k
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Comment: Comment: Italicise
23 months ago Kevin Blighe ★ 3.9k
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793
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Comment: Comment: R: problem with running time-series analysis software: Mfuzz
24 months ago Kevin Blighe ★ 3.9k
1
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2.5k
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Comment: Comment: Print EnhancedVolcano Plot as jpeg or similar in R Notebook
24 months ago Kevin Blighe ★ 3.9k
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1
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2.5k
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Comment: Comment: Print EnhancedVolcano Plot as jpeg or similar in R Notebook
24 months ago Kevin Blighe ★ 3.9k
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1.5k
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Comment: Comment: Handling NA values in limma's voom design matrix
24 months ago Kevin Blighe ★ 3.9k
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0
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832
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Comment: Comment: different sample size from each individual
2.0 years ago Kevin Blighe ★ 3.9k
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1
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832
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Comment: Comment: different sample size from each individual
2.0 years ago Kevin Blighe ★ 3.9k
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0
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1.1k
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Comment: Comment: How to properly use DESeq2 for an experiment
2.0 years ago Kevin Blighe ★ 3.9k
0
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1
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8.4k
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Comment: Comment: is it possible to use TPM in DESeq2 ?
2.0 years ago Kevin Blighe ★ 3.9k
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0
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1.4k
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Comment: Comment: How to run vst transformation
2.0 years ago Kevin Blighe ★ 3.9k
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0
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602
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Comment: Comment: Student
2.1 years ago Kevin Blighe ★ 3.9k
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2.1k
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Comment: Comment: GDCprepare error in TARGET-AML data access
2.1 years ago Kevin Blighe ★ 3.9k
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0
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2.0k
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Comment: Comment: How can i download maf files form GDC Data Portal?
2.1 years ago Kevin Blighe ★ 3.9k
0
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0
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581
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Comment: Comment: apt-format-result, where is the --annotation-file?
2.1 years ago Kevin Blighe ★ 3.9k
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1
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1.8k
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Comment: Comment: Problem with fgsea
2.1 years ago Kevin Blighe ★ 3.9k
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0
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2.6k
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Comment: Comment: How to get the rsID of 4 million SNPA
2.2 years ago Kevin Blighe ★ 3.9k
0
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0
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1.2k
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Comment: Comment: How to do functional analysis on differentially expressed gene list from RNA-seq
2.3 years ago Kevin Blighe ★ 3.9k
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1
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1.6k
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Comment: Comment: Issue with selectively labelling genes in the Enhanced Volcano package
2.3 years ago Kevin Blighe ★ 3.9k
1
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0
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1.2k
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Comment: Comment: Bioconductor-RipSeeker
2.4 years ago Kevin Blighe ★ 3.9k
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0
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794
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Comment: Comment: Ensembl REST API Endpoints
2.4 years ago Kevin Blighe ★ 3.9k
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0
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936
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Comment: Comment: Unable to label in Enhanced Volcano
2.4 years ago Kevin Blighe ★ 3.9k
588 results • Page 1 of 12
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