Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
2
votes
0
replies
963
views
Comment: Comment: Cannabis and KEGGgraph
20 months ago Guido Hooiveld ★ 4.1k
1
vote
0
replies
1.7k
views
Answer: Answer: OrgDb for maize
20 months ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
2.9k
views
Comment: Comment: compareCluster dotplot: how to modify the genesets order
20 months ago Guido Hooiveld ★ 4.1k
2
votes
2
replies
2.4k
views
Answer: Answer: How many of my genes from my gene list are in each KEGG pathway?
20 months ago Guido Hooiveld ★ 4.1k
10
votes
41
replies
10k
views
Ensembl plants at annotationHub?
ensembl ensembldb plant arabidopsis thaliana annotationhub
updated 19 months ago by • 0 • written 7.1 years ago by ★ 4.1k
0
votes
0
replies
749
views
Comment: Comment: Help with identifying genes mapped to KEGG pathway using pathview
21 months ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
2.0k
views
Answer: Answer: The order of those tied genes will be arbitrary, which may produce unexpected re
21 months ago Guido Hooiveld ★ 4.1k
1
vote
1
reply
1.5k
views
Comment: Comment: Only positive enrichment score in GSEA
21 months ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
8.3k
views
Answer: Answer: enrichGOgradient color change
21 months ago Guido Hooiveld ★ 4.1k
0
votes
0
replies
787
views
Comment: Comment: Error in enrichKEGG for a model organism
22 months ago Guido Hooiveld ★ 4.1k
1
vote
0
replies
2.1k
views
Comment: Comment: Error MakeOrgPackagefromNCBI
22 months ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
2.1k
views
Comment: Comment: Error MakeOrgPackagefromNCBI
22 months ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
1.4k
views
Answer: Answer: Problem with buildGOmap from clusterProfiler
22 months ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
5.4k
views
Comment: Comment: Looking for documentation about the use of "split = .sign" in enrichplot's dotpl
22 months ago Guido Hooiveld ★ 4.1k
1
vote
1
reply
5.4k
views
Comment: Comment: Looking for documentation about the use of "split = .sign" in enrichplot's dotpl
23 months ago Guido Hooiveld ★ 4.1k
1
vote
1
reply
5.4k
views
Comment: Comment: Looking for documentation about the use of "split = .sign" in enrichplot's dotpl
23 months ago Guido Hooiveld ★ 4.1k
1
vote
0
replies
1.4k
views
Comment: Comment: Enrichement with clusterProfiler and biomart
23 months ago Guido Hooiveld ★ 4.1k
1
vote
1
reply
1.2k
views
Comment: Comment: Access genes associated with GO terms for a topGO object created with gene2GO
23 months ago Guido Hooiveld ★ 4.1k
0
votes
0
replies
9.9k
views
Comment: Comment: No gene can be mapped error with clusterprofiler
23 months ago Guido Hooiveld ★ 4.1k
0
votes
0
replies
4.5k
views
Comment: Comment: clusterProfiler - custom annotations
23 months ago Guido Hooiveld ★ 4.1k
1
vote
0
replies
5.0k
views
Comment: Comment: clusterProfiler for KEGG enrichment (non-model species) Over-Representation Anal
23 months ago Guido Hooiveld ★ 4.1k
0
votes
0
replies
7.8k
views
Comment: Comment: GO enrichment analysis on Solanum lycopersicum proteomics dataset (UniProt IDs)
2.0 years ago Guido Hooiveld ★ 4.1k
0
votes
0
replies
1.2k
views
Comment: Comment: Error Oligo package asking for pd.2.0 package annotation
2.0 years ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
1.2k
views
Answer: Answer: Error Oligo package asking for pd.2.0 package annotation
2.0 years ago Guido Hooiveld ★ 4.1k
0
votes
0
replies
2.6k
views
Comment: Comment: How can we use the organism database created by makeorgPackageFromNCBI to KEGG a
2.1 years ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
2.6k
views
Comment: Comment: How can we use the organism database created by makeorgPackageFromNCBI to KEGG a
2.1 years ago Guido Hooiveld ★ 4.1k
0
votes
0
replies
2.3k
views
Comment: Comment: It's possible to use clusterProfiler without an annotationDBI package
2.1 years ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
2.3k
views
Comment: Comment: It's possible to use clusterProfiler without an annotationDBI package
2.1 years ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
2.3k
views
Comment: Comment: It's possible to use clusterProfiler without an annotationDBI package
2.1 years ago Guido Hooiveld ★ 4.1k
0
votes
2
replies
2.3k
views
Comment: Comment: It's possible to use clusterProfiler without an annotationDBI package
2.1 years ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
2.3k
views
Answer: Answer: It's possible to use clusterProfiler without an annotationDBI package
2.1 years ago Guido Hooiveld ★ 4.1k
1
vote
0
replies
2.9k
views
Comment: Comment: Annotation hub and clusterProfiler errors
2.2 years ago Guido Hooiveld ★ 4.1k
0
votes
0
replies
2.1k
views
Comment: Comment: Important Bioconductor Release 3.18 deadlines this week
2.2 years ago Guido Hooiveld ★ 4.1k
1
vote
1
reply
1.9k
views
Comment: Comment: Help with orgdb for non-model species via makeOrgPackageFromNCBI
2.2 years ago Guido Hooiveld ★ 4.1k
0
votes
0
replies
6.6k
views
Comment: Comment: NCBI Locus ID to gene ID conversion
2.2 years ago Guido Hooiveld ★ 4.1k
0
votes
0
replies
4.0k
views
Comment: Comment: pathview error "negative length vectors are not allowed
2.2 years ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
4.0k
views
Comment: Comment: pathview error "negative length vectors are not allowed
2.2 years ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
1.3k
views
Comment: Comment: Why do I obtain Identical Adj.P value when running edgeR ?
2.3 years ago Guido Hooiveld ★ 4.1k
1
vote
1
reply
2.3k
views
Answer: Answer: Cluster profiler emap plot - what are the annotations?
2.3 years ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
3.5k
views
Answer: Answer: apply clusterProfiler::simplify on merge_result list
2.3 years ago Guido Hooiveld ★ 4.1k
2
votes
1
reply
992
views
Answer: Answer: Broken UNITE 9.0 link (General FASTA Release)
2.3 years ago Guido Hooiveld ★ 4.1k
1
vote
0
replies
2.9k
views
Comment: Comment: ERROR in EnrichKEGG(), 'species should be listed' in, download method do not cha
2.4 years ago Guido Hooiveld ★ 4.1k
1
vote
1
reply
2.2k
views
Comment: Comment: pathview - a species in KEGG pathway but not in 'korg'
2.5 years ago Guido Hooiveld ★ 4.1k
1
vote
1
reply
1.1k
views
Answer: Answer: Affymetrix analysis Chiptype hgu133plus2hsentrezg.db vs hgu133plus2.db
2.5 years ago Guido Hooiveld ★ 4.1k
0
votes
0
replies
7.5k
views
Comment: Comment: Genelist input for ClusterProfiler
2.5 years ago Guido Hooiveld ★ 4.1k
1
vote
1
reply
10k
views
Comment: Comment: Ensembl plants at annotationHub?
2.5 years ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
2.3k
views
Comment: Comment: enhanced volcano , different -log10pvalue of the same gene
2.6 years ago Guido Hooiveld ★ 4.1k
0
votes
1
reply
2.1k
views
Comment: Comment: failed to use tximport for creating count matrix from kallisto
2.6 years ago Guido Hooiveld ★ 4.1k
1
vote
1
reply
2.1k
views
Comment: Comment: failed to use tximport for creating count matrix from kallisto
2.6 years ago Guido Hooiveld ★ 4.1k
1
vote
1
reply
2.1k
views
Comment: Comment: failed to use tximport for creating count matrix from kallisto
2.6 years ago Guido Hooiveld ★ 4.1k
724 results • Page 2 of 15
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6