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Comment: C: DESeq2: Sample outlier patterns 'switching' after normalization
4.7 years ago wunderl ▴ 40
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Answer: A: TMM Normalization: DESeqDataSet: some values in assay are negative
4.7 years ago wunderl ▴ 40
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Comment: C: TMM Normalization: DESeqDataSet: some values in assay are negative
4.7 years ago wunderl ▴ 40
3
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3
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925
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DESeq2: Sample outlier patterns 'switching' after normalization
deseq2 normalization
updated 4.8 years ago by 41k • written 4.8 years ago by ▴ 40
1
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1
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993
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All Pairwise Comparisons with DESeq2 While Controlling for Batch Effects: Does Reference Level Matter?
deseq2 differential expression batch correction design
updated 4.9 years ago by 41k • written 4.9 years ago by ▴ 40
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1.3k
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Comment: C: Batch Correction: DESeq2 Linear Model vs Batch-Correction-Specific Algorithms (R
4.9 years ago wunderl ▴ 40
4
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6.2k
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Answer: A: DESeq2 GLM modelling and Wald's test
4.9 years ago wunderl ▴ 40
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1.3k
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Comment: C: Batch Correction: DESeq2 Linear Model vs Batch-Correction-Specific Algorithms (R
4.9 years ago wunderl ▴ 40
4
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4
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1.3k
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Batch Correction: DESeq2 Linear Model vs Batch-Correction-Specific Algorithms (RUV, ComBat, ect.)
deseq2 differential expression batch correction
updated 4.9 years ago by 41k • written 4.9 years ago by ▴ 40
1
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879
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featureCounts Does Not Correctly Parse File Names
Rsubread featureCounts
updated 5.0 years ago by 50k • written 5.0 years ago by ▴ 40
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