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Comment: Comment: Comparison DESeq results using different model
3.7 years ago dequattro.concetta ▴ 10
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Comment: Comment: Comparison DESeq results using different model
3.7 years ago dequattro.concetta ▴ 10
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Comparison DESeq results using different model
Batch BatchEffect DESeq2
updated 3.7 years ago by 68k • written 3.7 years ago by ▴ 10
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Comment: Comment: Comparison DESeq results using different model
3.7 years ago dequattro.concetta ▴ 10
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Comment: Comment: How to setup sample design in DESeq2
4.6 years ago dequattro.concetta ▴ 10
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How to setup sample design in DESeq2
DESeq2
written 4.7 years ago by ▴ 10
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Comment: Comment: How to setup sample design in DESeq2
4.6 years ago dequattro.concetta ▴ 10
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Comment: Comment: How to setup sample design in DESeq2
4.6 years ago dequattro.concetta ▴ 10
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Comment: Answer: How to setup sample design in DESeq2
4.6 years ago dequattro.concetta ▴ 10
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3
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3.9k
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How to setup a two factor design in DESeq2
DESeq2 two-factorialdesign
updated 4.7 years ago by 43k • written 4.7 years ago by ▴ 10
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Comment: Answer: How to setup a two factor design in DESeq2
4.7 years ago dequattro.concetta ▴ 10
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5
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2.2k
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DESeq2 with many outliers
DESeq2
updated 4.9 years ago by 43k • written 4.9 years ago by ▴ 10
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Comment: Comment: DESeq2 with many outliers
4.9 years ago dequattro.concetta ▴ 10
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Comment: Comment: DESeq2 with many outliers
4.9 years ago dequattro.concetta ▴ 10
1
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2.8k
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importing RSEM data into DESeq2
deseq2 tximport
updated 5.1 years ago by 43k • written 5.1 years ago by ▴ 10
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Comment: C: overshrinkage of LFC with apeglm
5.1 years ago dequattro.concetta ▴ 10
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Comment: C: overshrinkage of LFC with apeglm
5.1 years ago dequattro.concetta ▴ 10
3
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5
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overshrinkage of LFC with apeglm
deseq2
updated 5.1 years ago by 43k • written 5.1 years ago by ▴ 10
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686
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Obtaining expanded model matrices when using apeglm
deseq2
updated 5.3 years ago by 43k • written 5.3 years ago by ▴ 10
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0
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1.3k
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Counting reads in genes with summarizeOverlaps
genomicAlignments summarizeOverlaps
5.4 years ago dequattro.concetta ▴ 10
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3.9k
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Comment: C: DESeq2 shrunken log fold changes
5.6 years ago dequattro.concetta ▴ 10
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3.9k
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Comment: C: DESeq2 shrunken log fold changes
5.6 years ago dequattro.concetta ▴ 10
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Comment: A: DESeq2 shrunken log fold changes
5.6 years ago dequattro.concetta ▴ 10
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17
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3.9k
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DESeq2 shrunken log fold changes
deseq2
5.6 years ago dequattro.concetta ▴ 10
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0
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3.9k
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Comment: C: DESeq2 shrunken log fold changes
5.6 years ago dequattro.concetta ▴ 10
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3.9k
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Comment: C: DESeq2 shrunken log fold changes
5.6 years ago dequattro.concetta ▴ 10
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3.9k
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Comment: C: DESeq2 shrunken log fold changes
5.6 years ago dequattro.concetta ▴ 10
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1
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3.9k
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Comment: C: DESeq2 shrunken log fold changes
5.6 years ago dequattro.concetta ▴ 10
0
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1
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693
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DESeq2 error multifactiorial design
deseq2
updated 5.6 years ago by 43k • written 5.6 years ago by ▴ 10
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2.8k
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Answer: A: DESeq2 pairwise comparison vs contrast function
6.3 years ago dequattro.concetta ▴ 10
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4
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2.8k
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DESeq2 pairwise comparison vs contrast function
deseq2
6.3 years ago dequattro.concetta ▴ 10
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