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Comment: C: Searching the archives
9.6 years ago Janet Young ▴ 740
7
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935
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Searching the archives
mailing list
updated 9.6 years ago by 25k • written 9.6 years ago by ▴ 740
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1
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1.6k
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Biostrings readDNAMultipleAlignment broken for fasta input
Alignment Biostrings Alignment Biostrings
updated 9.8 years ago by 16k • written 9.8 years ago by ▴ 740
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1.3k
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Comment: C: second GenomicRanges request - enable query-self comparison (and so ignoreSelf a
9.9 years ago Janet Young ▴ 740
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1.3k
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Comment: C: second GenomicRanges request - enable query-self comparison (and so ignoreSelf a
9.9 years ago Janet Young ▴ 740
0
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1
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1.3k
views
Comment: C: second GenomicRanges request - enable query-self comparison (and so ignoreSelf a
9.9 years ago Janet Young ▴ 740
0
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9
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1.3k
views
second GenomicRanges request - enable query-self comparison (and so ignoreSelf and ignoreRedundant) for GRangesList objects?
updated 9.9 years ago by ★ 11k • written 9.9 years ago by ▴ 740
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0
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2.3k
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GenomicRanges request - enable ignore.strand for findOverlaps comparing query with itself?
9.9 years ago Janet Young ▴ 740
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0
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1.9k
views
Comment: C: rtracklayer export: enable trackline for GRanges and RleLists, etc?
10.1 years ago Janet Young ▴ 740
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2
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1.9k
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rtracklayer export: enable trackline for GRanges and RleLists, etc?
updated 10.1 years ago by ★ 11k • written 10.1 years ago by ▴ 740
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2
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1.9k
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Comment: C: variantAnnotation: alternative GENETIC_CODE, and circular chromosomes?
10.3 years ago Janet Young ▴ 740
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1.9k
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Comment: C: variantAnnotation: alternative GENETIC_CODE, and circular chromosomes?
10.3 years ago Janet Young ▴ 740
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9
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1.9k
views
variantAnnotation: alternative GENETIC_CODE, and circular chromosomes?
VariantAnnotation Cancer Yeast annotate Biostrings VariantAnnotation VariantAnnotation
updated 10.3 years ago by 16k • written 10.3 years ago by ▴ 740
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2
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794
views
Gviz - Plot genes and data from - strand (3'-5') in 5'-3' direction
Cancer Cancer
updated 10.4 years ago by ★ 1.6k • written 10.4 years ago by ▴ 740
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2
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1.2k
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ggbio tracks with labelled: problem when I add a main title
Cancer ggbio Cancer ggbio
10.4 years ago Janet Young ▴ 740
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1
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1.2k
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Answer: A: ggbio tracks with labelled: problem when I add a main title
10.4 years ago Janet Young ▴ 740
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1
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4.1k
views
Comment: C: subset a RleList using GRanges object?
10.4 years ago Janet Young ▴ 740
0
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16
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4.1k
views
subset a RleList using GRanges object?
Coverage Cancer IRanges Coverage Cancer IRanges
updated 10.4 years ago by 16k • written 10.4 years ago by ▴ 740
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0
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669
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rtracklayer problem on large number of GRanges
Cancer Cancer
10.8 years ago Janet Young ▴ 740
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1
reply
1.3k
views
Comment: C: rtracklayer error?
10.8 years ago Janet Young ▴ 740
0
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1
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1.3k
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Comment: C: rtracklayer error?
10.8 years ago Janet Young ▴ 740
0
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0
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724
views
rtracklayer carrying over query results
rtracklayer rtracklayer
10.8 years ago Janet Young ▴ 740
0
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5
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1.3k
views
rtracklayer error?
Cancer rtracklayer Cancer rtracklayer
10.8 years ago Janet Young ▴ 740
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1
reply
1.3k
views
Answer: A: rtracklayer error?
10.8 years ago Janet Young ▴ 740
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1
reply
1.2k
views
Comment: C: speed of runmed on SimpleRleList
11.2 years ago Janet Young ▴ 740
0
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3
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1.2k
views
speed of runmed on SimpleRleList
Coverage Cancer Coverage Cancer
updated 11.2 years ago by 16k • written 11.2 years ago by ▴ 740
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1
reply
1.2k
views
repeat mask for mm10?
BSgenome BSgenome BSgenome BSgenome
11.5 years ago Janet Young ▴ 740
0
votes
1
reply
694
views
bug in Biostrings mismatchTable?
Alignment Alignment
updated 11.6 years ago by 16k • written 11.6 years ago by ▴ 740
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1
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516
views
can I use alignment utilities (mismatchTable, etc) on externally-generated alignments?
Alignment Cancer Alignment Cancer
updated 11.6 years ago by ★ 11k • written 11.6 years ago by ▴ 740
0
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1
reply
792
views
issue with Views on PairwiseAlignmentsSingleSubject?
updated 11.6 years ago by 16k • written 11.6 years ago by ▴ 740
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1
reply
882
views
nearest for GRanges ignoring overlapping ranges
Cancer IRanges GenomicRanges Cancer IRanges GenomicRanges
updated 11.7 years ago by ★ 6.8k • written 11.7 years ago by ▴ 740
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2
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1.1k
views
distanceToNearest for GRanges?
IRanges GenomicRanges IRanges GenomicRanges
updated 11.7 years ago by ★ 6.8k • written 11.7 years ago by ▴ 740
0
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1
reply
675
views
useDevel and update all packages - wrong library location?
Cancer Cancer
updated 11.7 years ago by 25k • written 11.7 years ago by ▴ 740
0
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1
reply
1.2k
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Comment: C: rtracklayer blocks function
11.7 years ago Janet Young ▴ 740
0
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3
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1.2k
views
rtracklayer blocks function
rtracklayer rtracklayer
updated 11.7 years ago by ★ 11k • written 11.7 years ago by ▴ 740
0
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1
reply
1.9k
views
Comment: C: PWMscoreStartingAt and ambiguous subject seqs
12.0 years ago Janet Young ▴ 740
0
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1
reply
1.9k
views
Comment: C: PWMscoreStartingAt and ambiguous subject seqs
12.0 years ago Janet Young ▴ 740
0
votes
13
replies
1.9k
views
PWMscoreStartingAt and ambiguous subject seqs
Cancer Biostrings GLAD Cancer Biostrings GLAD
updated 12.0 years ago by 16k • written 12.0 years ago by ▴ 740
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0
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1.0k
views
Comment: C: distanceToNearest for GRanges?
12.1 years ago Janet Young ▴ 740
1
vote
3
replies
1.0k
views
distanceToNearest for GRanges?
Cancer Cancer
updated 12.1 years ago by ★ 1.6k • written 12.1 years ago by ▴ 740
0
votes
1
reply
749
views
lumiHumanAll.db - wrong information in lumiHumanAllCHR for some probes?
Cancer probe Cancer probe
updated 12.4 years ago by 6.7k • written 12.4 years ago by ▴ 740
0
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0
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927
views
unimplemented options select=last and select=arbitrary in findOverlaps for GRanges
12.4 years ago Janet Young ▴ 740
0
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1
reply
891
views
possible bug in ShortRead qa/ppnCount
updated 12.5 years ago by 25k • written 12.5 years ago by ▴ 740
0
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0
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3.4k
views
Comment: C: views on Rle using GRanges object
12.7 years ago Janet Young ▴ 740
0
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8
replies
3.4k
views
views on Rle using GRanges object
RNASeq Coverage GO rtracklayer RNASeq Coverage GO rtracklayer
updated 12.7 years ago by 16k • written 12.7 years ago by ▴ 740
0
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1
reply
1.2k
views
rtracklayer import.bw on gz file makes R crash
updated 12.7 years ago by ★ 11k • written 12.7 years ago by ▴ 740
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0
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1.7k
views
Comment: C: import.bw to Rle?
12.7 years ago Janet Young ▴ 740
0
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2
replies
1.7k
views
import.bw to Rle?
GO Cancer convert GO Cancer convert
updated 12.7 years ago by ★ 11k • written 12.7 years ago by ▴ 740
0
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0
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984
views
Comment: C: lumi/Biobase combine and gplots interaction
12.8 years ago Janet Young ▴ 740
0
votes
2
replies
984
views
lumi/Biobase combine and gplots interaction
Cancer Cancer
updated 12.8 years ago by 25k • written 12.8 years ago by ▴ 740
118 results • Page 2 of 3
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