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Comment: normalization of ChIP-seq data by using the spike-ins or by using total library
17 months ago
Bogdan
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Comment: normalization of ChIP-seq data by using the spike-ins or by using total library
17 months ago
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Comment: normalization of ChIP-seq data by using the spike-ins or by using total library
17 months ago
Bogdan
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Comment: Spike-in normalization in EdgeR
17 months ago
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Comment: Using edgeR and a spike-in to calculate absolute abundance
17 months ago
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Comment:
Comment: normalization of ChIP-seq data by using the spike-ins or by using total library
17 months ago
Bogdan
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Comment:
Comment: normalization of ChIP-seq data by using the spike-ins or by using total library
18 months ago • updated 17 months ago
Bogdan
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Comment: normalization of ChIP-seq data by using the spike-ins or by using total library
18 months ago
Bogdan
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Comment: normalization of ChIP-seq data by using the spike-ins or by using total library
18 months ago
Bogdan
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Comment: DiffBind and peak counts as input
19 months ago
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Comment: statistics : edger or DESeq2 to asses the differential binding using the averag
19 months ago
Bogdan
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Comment: statistics : edger or DESeq2 to asses the differential binding using the averag
19 months ago
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Comment: statistics : edger or DESeq2 to asses the differential binding using the averag
19 months ago
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Comment: installation of BioC packages on Mac M1 Monterrey OS
19 months ago
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Comment: ShortRead Installation in R 4.2.0 and zlib library
19 months ago
Bogdan
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1.7k
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Comment: performing the differential binding in ChIP-seq
2.0 years ago
Bogdan
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1.7k
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Comment: performing the differential binding in ChIP-seq
2.0 years ago
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Comment: scDblFinder and amulet
2.0 years ago
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Comment: scDblFinder and amulet
2.0 years ago
Bogdan
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2.1k
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Comment: reading hdf5 files without hdf5r
2.1 years ago
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Comment: reading hdf5 files without hdf5r
2.1 years ago
Bogdan
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826
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Comment: scATAC-seq median fragments per cell
2.1 years ago
Bogdan
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920
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Comment: ChIP-seq or CUT&RUN enrichment
2.3 years ago
Bogdan
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Comment: AnnotationDbi
2.6 years ago
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Comment: TCL/TK in R
2.6 years ago
Bogdan
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Comment: TCL/TK in R
2.6 years ago
Bogdan
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Comment: TCL/TK in R
2.6 years ago
Bogdan
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Comment: TCL/TK in R
2.6 years ago
Bogdan
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741
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Comment: gene ontologies for a set of genes
2.8 years ago
Bogdan
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3.8k
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Comment:
Comment: extracting the KEGG pathway for a set of genes
2.8 years ago
Bogdan
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3.8k
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Comment:
Comment: extracting the KEGG pathway for a set of genes
2.8 years ago
Bogdan
▴ 670
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707
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Comment:
Comment: identifying trends in RNA-seq data
2.8 years ago
Bogdan
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16k
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Comment: about MapIds function
2.9 years ago
Bogdan
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1.6k
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Comment:
Comment: to extract the mRNA sequences of the canonical RefSeq genes
3.5 years ago
Bogdan
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1.6k
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Comment:
Comment: to extract the mRNA sequences of the canonical RefSeq genes
3.5 years ago
Bogdan
▴ 670
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1.6k
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Comment:
C: analysis of FACS data using BioC
3.6 years ago
Bogdan
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1.6k
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Comment:
C: analysis of FACS data using BioC
3.6 years ago
Bogdan
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1.6k
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Comment:
C: analysis of FACS data using BioC
3.6 years ago
Bogdan
▴ 670
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1.6k
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Comment:
C: analysis of FACS data using BioC
3.6 years ago
Bogdan
▴ 670
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1.1k
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Comment:
C: extracting the genes associated with a specific pathway
4.0 years ago
Bogdan
▴ 670
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1.1k
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Comment:
C: extracting the genes associated with a specific pathway
4.0 years ago
Bogdan
▴ 670
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1
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1.9k
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Comment:
C: normalization methods for scRNA-seq and RNA-seq in specific cases of increased g
4.3 years ago
Bogdan
▴ 670
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1.9k
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Comment:
C: normalization methods for scRNA-seq and RNA-seq in specific cases of increased g
4.3 years ago
Bogdan
▴ 670
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1.9k
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Comment:
C: normalization methods for scRNA-seq and RNA-seq in specific cases of increased g
4.3 years ago
Bogdan
▴ 670
0
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0
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1.9k
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Comment:
C: normalization methods for scRNA-seq and RNA-seq in specific cases of increased g
4.3 years ago
Bogdan
▴ 670
0
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1
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1.9k
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Comment:
C: normalization methods for scRNA-seq and RNA-seq in specific cases of increased g
4.3 years ago
Bogdan
▴ 670
0
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0
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1.6k
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Comment:
C: analysis of multiple time points * 2 replicates of scRNA-seq
4.3 years ago
Bogdan
▴ 670
0
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0
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756
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Comment:
C: scRNA-seq analysis : the IDENTITY of the CLUSTERS across MULTIPLE EXPERIMENTS
4.4 years ago
Bogdan
▴ 670
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0
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1.8k
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Comment:
C: analysis of multiple batches and multiple treatment conditions in scRNA-seq
4.8 years ago
Bogdan
▴ 670
0
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1
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1.8k
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Comment:
C: analysis of multiple batches and multiple treatment conditions in scRNA-seq
4.8 years ago
Bogdan
▴ 670
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