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2
votes
8
replies
837
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Are voomByGroup and voomLmFit compatible?
limma voomLmFit voomByGroup
updated 5 months ago by 53k • written 6 months ago by ▴ 30
0
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1
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837
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Comment: Comment: Are voomByGroup and voomLmFit compatible?
5 months ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
837
views
Comment: Comment: Are voomByGroup and voomLmFit compatible?
5 months ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
693
views
Comment: Comment: Very different log2 Fold changes with DESeq2 and explict calculation
6 months ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
693
views
Comment: Comment: Very different log2 Fold changes with DESeq2 and explict calculation
6 months ago richardallenfriedmanbrooklyn ▴ 30
2
votes
6
replies
693
views
Very different log2 Fold changes with DESeq2 and explict calculation
DESeq2
6 months ago richardallenfriedmanbrooklyn ▴ 30
0
votes
2
replies
693
views
Comment: Comment: Very different log2 Fold changes with DESeq2 and explict calculation
6 months ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
447
views
Comment: Comment: Difference between logFC in limma-voom and weighted limma-voom
6 months ago richardallenfriedmanbrooklyn ▴ 30
1
vote
2
replies
447
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Difference between logFC in limma-voom and weighted limma-voom
limma voom weighting
6 months ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
2.6k
views
Comment: Comment: Non-monotonic voomByGroup plot in Xenium data
7 months ago richardallenfriedmanbrooklyn ▴ 30
1
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2
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2.6k
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Non-monotonic voomByGroup plot in Xenium data
XeniumIO voom
7 months ago richardallenfriedmanbrooklyn ▴ 30
0
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0
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2.1k
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Comment: Comment: Should Xenium pseudobulk experiments be analysed like microarrays (limma) or lik
7 months ago richardallenfriedmanbrooklyn ▴ 30
0
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0
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2.1k
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Comment: Comment: Should Xenium pseudobulk experiments be analysed like microarrays (limma) or lik
7 months ago richardallenfriedmanbrooklyn ▴ 30
4
votes
8
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2.1k
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Should Xenium pseudobulk experiments be analysed like microarrays (limma) or like RNASeq (edgeR,Deseq2, or limma-voom)
Deseq2 edgeR limma xenium Voom
7 months ago richardallenfriedmanbrooklyn ▴ 30
0
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1
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2.1k
views
Comment: Comment: Should Xenium pseudobulk experiments be analysed like microarrays (limma) or lik
7 months ago richardallenfriedmanbrooklyn ▴ 30
0
votes
1
reply
2.1k
views
Comment: Comment: Should Xenium pseudobulk experiments be analysed like microarrays (limma) or lik
7 months ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
3.9k
views
Comment: Comment: Is voomByGroup available in limma?
8 months ago richardallenfriedmanbrooklyn ▴ 30
1
vote
2
replies
3.9k
views
Is voomByGroup available in limma?
limmaGUI voom
8 months ago richardallenfriedmanbrooklyn ▴ 30
1
vote
1
reply
1.5k
views
Comment: Comment: AffylmGUI does not start wit R 4.4.1
17 months ago richardallenfriedmanbrooklyn ▴ 30
0
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0
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1.5k
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Comment: Comment: AffylmGUI does not start wit R 4.4.1
17 months ago richardallenfriedmanbrooklyn ▴ 30
0
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2
replies
1.5k
views
Comment: Comment: AffylmGUI does not start wit R 4.4.1
17 months ago richardallenfriedmanbrooklyn ▴ 30
0
votes
1
reply
1.5k
views
Comment: Comment: AffylmGUI does not start wit R 4.4.1
17 months ago richardallenfriedmanbrooklyn ▴ 30
2
votes
8
replies
1.5k
views
AffylmGUI does not start wit R 4.4.1
affylmGUI
updated 16 months ago by 53k • written 17 months ago by ▴ 30
6
votes
5
replies
2.4k
views
error message when I use the bsseq read.bismark command to read a genome wide cytosine report generated by bismark.
bsseq
updated 2.4 years ago by ▴ 760 • written 2.5 years ago by ▴ 30
0
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0
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2.4k
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Comment: Comment: error message when I use the bsseq read.bismark command to read a genome wide cy
2.5 years ago richardallenfriedmanbrooklyn ▴ 30
1
vote
1
reply
2.4k
views
Answer: Answer: error message when I use the bsseq read.bismark command to read a genome wide cy
2.5 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
1.5k
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Comment: Comment: How to annotate mir4.1 arrays?
2.5 years ago richardallenfriedmanbrooklyn ▴ 30
1
vote
4
replies
1.5k
views
How to annotate mir4.1 arrays?
AffymetrixChip miRNA oligo
2.8 years ago • updated 2.5 years ago richardallenfriedmanbrooklyn ▴ 30
0
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0
replies
1.5k
views
Comment: Comment: How to annotate mir4.1 arrays?
2.8 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
2.1k
views
Comment: Comment: could not duplicate the fragment length in "Reads to Regions" csaw tutorial
4.7 years ago richardallenfriedmanbrooklyn ▴ 30
0
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1
reply
2.1k
views
Comment: Comment: could not duplicate the fragment length in "Reads to Regions" csaw tutorial
4.7 years ago richardallenfriedmanbrooklyn ▴ 30
2
votes
4
replies
2.1k
views
could not duplicate the fragment length in "Reads to Regions" csaw tutorial
chipseq csaw; crosscorrelation
4.8 years ago • updated 4.7 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
1
reply
6.2k
views
Comment: C: Unable to download hg19.generanges as part of DMRcatedata package
5.4 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
1
reply
6.2k
views
Comment: C: Unable to download hg19.generanges as part of DMRcatedata package
5.4 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
6.2k
views
Comment: C: Unable to download hg19.generanges as part of DMRcatedata package
5.4 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
6.2k
views
Comment: C: Unable to download hg19.generanges as part of DMRcatedata package
5.4 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
2
replies
6.2k
views
Comment: C: Unable to download hg19.generanges as part of DMRcatedata package
5.4 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
1
reply
6.2k
views
Comment: C: Unable to download hg19.generanges as part of DMRcatedata package
5.4 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
1
reply
6.2k
views
Comment: C: Unable to download hg19.generanges as part of DMRcatedata package
5.4 years ago richardallenfriedmanbrooklyn ▴ 30
8
votes
33
replies
6.2k
views
Unable to download hg19.generanges as part of DMRcatedata package
DMRacte DMRcateranges ExperimentHub hg19.generanges
updated 5.1 years ago by ▴ 10 • written 5.4 years ago by ▴ 30
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