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2
votes
8
replies
688
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Are voomByGroup and voomLmFit compatible?
limma voomLmFit voomByGroup
updated 9 weeks ago by 53k • written 12 weeks ago by ▴ 30
0
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1
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688
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Comment: Comment: Are voomByGroup and voomLmFit compatible?
11 weeks ago richardallenfriedmanbrooklyn ▴ 30
0
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0
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688
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Comment: Comment: Are voomByGroup and voomLmFit compatible?
11 weeks ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
540
views
Comment: Comment: Very different log2 Fold changes with DESeq2 and explict calculation
12 weeks ago richardallenfriedmanbrooklyn ▴ 30
0
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0
replies
540
views
Comment: Comment: Very different log2 Fold changes with DESeq2 and explict calculation
12 weeks ago richardallenfriedmanbrooklyn ▴ 30
2
votes
6
replies
540
views
Very different log2 Fold changes with DESeq2 and explict calculation
DESeq2
12 weeks ago richardallenfriedmanbrooklyn ▴ 30
0
votes
2
replies
540
views
Comment: Comment: Very different log2 Fold changes with DESeq2 and explict calculation
12 weeks ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
337
views
Comment: Comment: Difference between logFC in limma-voom and weighted limma-voom
3 months ago richardallenfriedmanbrooklyn ▴ 30
1
vote
2
replies
337
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Difference between logFC in limma-voom and weighted limma-voom
limma voom weighting
3 months ago richardallenfriedmanbrooklyn ▴ 30
0
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0
replies
2.5k
views
Comment: Comment: Non-monotonic voomByGroup plot in Xenium data
3 months ago richardallenfriedmanbrooklyn ▴ 30
1
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2
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2.5k
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Non-monotonic voomByGroup plot in Xenium data
XeniumIO voom
3 months ago richardallenfriedmanbrooklyn ▴ 30
0
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0
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1.8k
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Comment: Comment: Should Xenium pseudobulk experiments be analysed like microarrays (limma) or lik
3 months ago richardallenfriedmanbrooklyn ▴ 30
0
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0
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1.8k
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Comment: Comment: Should Xenium pseudobulk experiments be analysed like microarrays (limma) or lik
3 months ago richardallenfriedmanbrooklyn ▴ 30
4
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8
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1.8k
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Should Xenium pseudobulk experiments be analysed like microarrays (limma) or like RNASeq (edgeR,Deseq2, or limma-voom)
Deseq2 edgeR limma xenium Voom
3 months ago richardallenfriedmanbrooklyn ▴ 30
0
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1
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1.8k
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Comment: Comment: Should Xenium pseudobulk experiments be analysed like microarrays (limma) or lik
3 months ago richardallenfriedmanbrooklyn ▴ 30
0
votes
1
reply
1.8k
views
Comment: Comment: Should Xenium pseudobulk experiments be analysed like microarrays (limma) or lik
3 months ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
3.7k
views
Comment: Comment: Is voomByGroup available in limma?
4 months ago richardallenfriedmanbrooklyn ▴ 30
1
vote
2
replies
3.7k
views
Is voomByGroup available in limma?
limmaGUI voom
4 months ago richardallenfriedmanbrooklyn ▴ 30
1
vote
1
reply
1.4k
views
Comment: Comment: AffylmGUI does not start wit R 4.4.1
13 months ago richardallenfriedmanbrooklyn ▴ 30
0
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0
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1.4k
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Comment: Comment: AffylmGUI does not start wit R 4.4.1
14 months ago richardallenfriedmanbrooklyn ▴ 30
0
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2
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1.4k
views
Comment: Comment: AffylmGUI does not start wit R 4.4.1
14 months ago richardallenfriedmanbrooklyn ▴ 30
0
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1
reply
1.4k
views
Comment: Comment: AffylmGUI does not start wit R 4.4.1
14 months ago richardallenfriedmanbrooklyn ▴ 30
2
votes
8
replies
1.4k
views
AffylmGUI does not start wit R 4.4.1
affylmGUI
updated 13 months ago by 53k • written 14 months ago by ▴ 30
6
votes
5
replies
2.2k
views
error message when I use the bsseq read.bismark command to read a genome wide cytosine report generated by bismark.
bsseq
updated 2.2 years ago by ▴ 760 • written 2.3 years ago by ▴ 30
0
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0
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2.2k
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Comment: Comment: error message when I use the bsseq read.bismark command to read a genome wide cy
2.3 years ago richardallenfriedmanbrooklyn ▴ 30
1
vote
1
reply
2.2k
views
Answer: Answer: error message when I use the bsseq read.bismark command to read a genome wide cy
2.3 years ago richardallenfriedmanbrooklyn ▴ 30
0
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0
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1.4k
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Comment: Comment: How to annotate mir4.1 arrays?
2.3 years ago richardallenfriedmanbrooklyn ▴ 30
1
vote
4
replies
1.4k
views
How to annotate mir4.1 arrays?
AffymetrixChip miRNA oligo
2.5 years ago • updated 2.3 years ago richardallenfriedmanbrooklyn ▴ 30
0
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0
replies
1.4k
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Comment: Comment: How to annotate mir4.1 arrays?
2.5 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
1.9k
views
Comment: Comment: could not duplicate the fragment length in "Reads to Regions" csaw tutorial
4.4 years ago richardallenfriedmanbrooklyn ▴ 30
0
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1
reply
1.9k
views
Comment: Comment: could not duplicate the fragment length in "Reads to Regions" csaw tutorial
4.5 years ago richardallenfriedmanbrooklyn ▴ 30
2
votes
4
replies
1.9k
views
could not duplicate the fragment length in "Reads to Regions" csaw tutorial
chipseq csaw; crosscorrelation
4.5 years ago • updated 4.4 years ago richardallenfriedmanbrooklyn ▴ 30
0
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1
reply
5.8k
views
Comment: C: Unable to download hg19.generanges as part of DMRcatedata package
5.2 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
1
reply
5.8k
views
Comment: C: Unable to download hg19.generanges as part of DMRcatedata package
5.2 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
5.8k
views
Comment: C: Unable to download hg19.generanges as part of DMRcatedata package
5.2 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
0
replies
5.8k
views
Comment: C: Unable to download hg19.generanges as part of DMRcatedata package
5.2 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
2
replies
5.8k
views
Comment: C: Unable to download hg19.generanges as part of DMRcatedata package
5.2 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
1
reply
5.8k
views
Comment: C: Unable to download hg19.generanges as part of DMRcatedata package
5.2 years ago richardallenfriedmanbrooklyn ▴ 30
0
votes
1
reply
5.8k
views
Comment: C: Unable to download hg19.generanges as part of DMRcatedata package
5.2 years ago richardallenfriedmanbrooklyn ▴ 30
8
votes
33
replies
5.8k
views
Unable to download hg19.generanges as part of DMRcatedata package
DMRacte DMRcateranges ExperimentHub hg19.generanges
updated 4.9 years ago by ▴ 10 • written 5.2 years ago by ▴ 30
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