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ExperimentHub
•
reset
0
votes
4
replies
980
views
Cannot connect to ExperimentHub server
ExperimentHub
3 months ago
yanling
• 0
6
votes
9
replies
4.0k
views
BiocFileCache/ExperimentHub/AnnotationHub temporary ERROR
BiocFileCache
AnnotationHub
ExperimentHub
updated 6 days ago by
Melissa
• 0 • written 4 months ago by
shepherl
3.8k
0
votes
1
reply
649
views
scRNAseq package and cell type annotations
ExperimentHub
R
ExperimentHubData
scRNAseq
SingleR
updated 12 months ago by
Peter Hickey
▴ 670 • written 12 months ago by
cathalgking
▴ 10
0
votes
3
replies
652
views
Can I create my own, private ExperimentHub instance?
ExperimentHub
19 months ago
sandmann.t
▴ 70
0
votes
1
reply
1.0k
views
News:
Updates to BiocFileCache, AnnotationHub, and ExperimentHub
BiocFileCache
AnnotationHub
ExperimentHub
cache
3.0 years ago • updated 2.9 years ago
shepherl
3.8k
8
votes
33
replies
3.5k
views
Unable to download hg19.generanges as part of DMRcatedata package
DMRacte
DMRcateranges
ExperimentHub
hg19.generanges
updated 3.2 years ago by
friedmanhiccc
▴ 10 • written 3.5 years ago by
richardallenfriedmanbrooklyn
▴ 20
8
votes
16
replies
5.8k
views
Cannot connect to ExperimentHub server
ExperimentHub
AnnotationHub
SingleR
updated 3.6 years ago by
shepherl
3.8k • written 3.6 years ago by
enricoferrero
▴ 660
2
votes
2
replies
657
views
ExperimentHub downloading files to home directory (~)
ExperimentHub
updated 4.9 years ago by
shepherl
3.8k • written 4.9 years ago by
story.benjamin
▴ 20
4
votes
10
replies
1.7k
views
Can't access devel version of ExperimentHub in Travis CI
experimenthub
continuous-integration
5.5 years ago
Kyle Johnsen
▴ 20
1
vote
1
reply
695
views
What is the function of the 'make-metadata.R' script when making a ExperimentHub package?
experimenthub
updated 5.5 years ago by
shepherl
3.8k • written 5.6 years ago by
Kyle Johnsen
▴ 20
0
votes
7
replies
2.1k
views
ExperimentHub wackiness (which breaks packages that depend upon experimentHub-provided *data pkgs)
experimenthub
updated 5.6 years ago by
Martin Morgan
25k • written 5.6 years ago by
Tim Triche
★ 4.2k
5
votes
4
replies
1.3k
views
Eliminating repetitive calls to ExperimentHub
experimenthub
annotationhub
large dataset
5.8 years ago
slinker
▴ 20
5
votes
2
replies
1.6k
views
Setting ExperimentHub Cache Location
experimenthub
updated 6.1 years ago by
Martin Morgan
25k • written 6.1 years ago by
Mike Smith
★ 6.4k
5
votes
11
replies
2.5k
views
Certificate problem with ExperimentHub / AnnotationHub
software error
curatedmetagenomicdata
annotationhub
experimenthub
updated 7.2 years ago by
Levi Waldron
★ 1.1k • written 7.2 years ago by
morganx
▴ 10
5
votes
3
replies
1.4k
views
ExperimentHub()[["EH359"]] has character expression values
ExperimentHub
curatedMetagenomicData
updated 7.3 years ago by
Lucas Schiffer
▴ 240 • written 7.4 years ago by
Wolfgang Huber
★ 13k
2
votes
1
reply
1.1k
views
ExperimentHub - Error: database is corrupt
ExperimentHub
7.4 years ago
francois.collin
• 0
4
votes
7
replies
1.5k
views
AnnotationHub and ExperimentHub make "~" directory in my home
annotationhub
experimenthub
updated 7.6 years ago by
Valerie Obenchain
★ 6.8k • written 7.6 years ago by
Michael Love
41k
0
votes
2
replies
1.4k
views
Getting "error: database is corrupt" when using ExperimentHub()
experimenthub
gse62944
updated 7.7 years ago by
Valerie Obenchain
★ 6.8k • written 7.7 years ago by
shinx558
• 0
18 results • Page
1 of 1
Recent ...
Replies
Comment: edgeR, 3 x 2 design with a batch effect and contrasts
by
JKim
• 0
Thank you. I think I found why the order matters. > Although an intercept-free design matrix has been coded using the 0+ notation, the in…
Comment: Unable to annotate ExpressionSet object from hugene11st chip
by
Efra
• 0
I did as you told, and after running ```eset.annot <- annotateEset(eset, hugene11sttranscriptcluster.db)``` I got the next output: ``` 'se…
Comment: BioC2024 abstract submission is open!
by
howell
• 0
What are the conditions for approval of people in difficult circumstances? I want this scholarship
Comment: European Bioconductor Conference 2023 planning
by
william
• 0
[@MariaDoyle][1] Without a doubt. In that position, I will be included in the discussion. [1]: https://support.bioconductor.org/u/239…
Comment: Problem converting msigdb Human symbols to Zebrafish in gmt format
by
Georg
• 0
Thank you for the detailed response. The code worked right away. I appreciate the quick response.
Votes
C: How to check that the reads in two fastq files are in the same order
Answer: edgeR, 3 x 2 design with a batch effect and contrasts
Answer: Need help with creating and plotting temporal clustering analysis of DEGs
Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
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