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Comment: Difference between vst() and varianceStabilizingTransform()
12 months ago
chiwut.wong
• 0
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3
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Difference between vst() and varianceStabilizingTransform()
DESeq2
written 12 months ago by
chiwut.wong
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0
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4.5k
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Is it proper to compare two WGCNA matrixes if they were raised to different power (soft threshold)?
Network
cluster
WGCNA
RNASeq
updated 17 months ago by
James W. MacDonald
67k • written 17 months ago by
chiwut.wong
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5.0k
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Comment:
Comment: Deseq2 normalization for WGCNA
2.7 years ago
chiwut.wong
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0
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0
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976
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The gene clusters from the WGCNA dendrogram output are not in order
Clustering
WGCNA
2.7 years ago
chiwut.wong
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0
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0
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958
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Only 1 gene/ feature is present in module after WGCNA analysis
RNASeq
Clustering
cluster
WGCNA
2.7 years ago
chiwut.wong
• 0
0
votes
1
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2.1k
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Removing batch effect by sva or combat and subsequent correlation analysis by WGCNA
WGCNA
impute
sva
updated 3.6 years ago by
sebastian.lobentanzer
▴ 50 • written 3.6 years ago by
chiwut.wong
• 0
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