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Bioconductor Digest, Vol 117, Issue 6
affy affy
13.0 years ago Dick Beyer ★ 1.4k
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Comment: C: getBM weird error
13.1 years ago Dick Beyer ★ 1.4k
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getBM weird error
updated 13.1 years ago by ★ 8.2k • written 13.1 years ago by ★ 1.4k
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Comment: C: getBM weird error
13.1 years ago Dick Beyer ★ 1.4k
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Comment: C: getBM weird error
13.1 years ago Dick Beyer ★ 1.4k
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1.1k
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lumi and/or beadarray for getting beadSummary
Microarray Annotation EBImage Microarray Annotation EBImage
updated 14.1 years ago by ★ 6.6k • written 14.2 years ago by ★ 1.4k
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Biostats/Bioinformatics job University of Washington
Microarray Microarray
14.4 years ago Dick Beyer ★ 1.4k
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969
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pdmClass plot error
pdmclass pdmclass
14.4 years ago Dick Beyer ★ 1.4k
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1.5k
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Problem with BGandNorm() from the Agi4x44PreProcess package
vsn vsn
updated 14.5 years ago by ★ 13k • written 14.5 years ago by ★ 1.4k
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Answer: A: DEGraph demo exprData question
14.7 years ago Dick Beyer ★ 1.4k
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DEGraph demo exprData question
GO DEGraph GO DEGraph
14.7 years ago Dick Beyer ★ 1.4k
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Comment: C: IPI to entrez id
14.7 years ago Dick Beyer ★ 1.4k
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IPI to entrez id
Proteomics GO biomaRt Proteomics GO biomaRt
14.7 years ago Dick Beyer ★ 1.4k
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Answer: A: IPI to entrez id
14.7 years ago Dick Beyer ★ 1.4k
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Comment: C: IPI to entrez id
14.7 years ago Dick Beyer ★ 1.4k
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Basic Question about gcrma & exporting to excel > (command not working)
Microarray affy gcrma oligo arrayQualityMetrics DECIPHER Microarray affy gcrma oligo
15.4 years ago Dick Beyer ★ 1.4k
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mistmatch in GO terms between topGO_1.14.0 and org.Mm.eg.db_2.3.6
Annotation GO Mus musculus PROcess topGO Annotation GO Mus musculus PROcess topGO
15.7 years ago Dick Beyer ★ 1.4k
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Comment: C: mistmatch in GO terms between topGO_1.14.0 and org.Mm.eg.db_2.3.6
15.7 years ago Dick Beyer ★ 1.4k
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mistmatch in GO terms between topGO_1.14.0 and org.Mm.eg.db_2.3.6
GO Mus musculus PROcess topGO GO Mus musculus PROcess topGO
updated 15.7 years ago by 21k • written 15.7 years ago by ★ 1.4k
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Comment: C: Bioconductor Digest, Vol 84, Issue 19
15.7 years ago Dick Beyer ★ 1.4k
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Comment: C: Bioconductor Digest, Vol 84, Issue 19
15.7 years ago Dick Beyer ★ 1.4k
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Bioconductor Digest, Vol 84, Issue 19
Proteomics Proteomics
updated 15.7 years ago by 25k • written 15.7 years ago by ★ 1.4k
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how to get number of samples from GSE with GEOquery
GEOquery GEOquery
updated 15.9 years ago by ▴ 170 • written 15.9 years ago by ★ 1.4k
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Answer: A: how to get number of samples from GSE with GEOquery
15.9 years ago Dick Beyer ★ 1.4k
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859
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gene2pathway: Error in pathIDsLev1
15.9 years ago Dick Beyer ★ 1.4k
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0
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qaGeneST bug
ArrayTools ArrayTools
16.1 years ago Dick Beyer ★ 1.4k
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problems with snapCGH readPositionalInfo processCGH
CGH snapCGH CGH snapCGH
16.2 years ago Dick Beyer ★ 1.4k
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2
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1.1k
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support for miRNA-1_0?
affy microRNA affy microRNA
updated 16.2 years ago by ★ 3.9k • written 16.2 years ago by ★ 1.4k
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Comment: C: support for miRNA-1_0?
16.2 years ago Dick Beyer ★ 1.4k
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1.8k
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question about p-values in maSigPro
affy maSigPro affy maSigPro
16.3 years ago Dick Beyer ★ 1.4k
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Answer: A: question about p-values in maSigPro
16.3 years ago Dick Beyer ★ 1.4k
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Comment: C: combining GSA and lmFit
16.5 years ago Dick Beyer ★ 1.4k
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1.9k
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Answer: A: combining GSA and lmFit
16.5 years ago Dick Beyer ★ 1.4k
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856
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combining GSA and lmFit
Microarray limma Microarray limma
16.5 years ago Dick Beyer ★ 1.4k
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1.6k
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sd==0 for some probesets when using gcrma
Microarray Proteomics Epigenetics Normalization GO Cancer hgu95av2 affy graph gcrma GO
16.9 years ago Dick Beyer ★ 1.4k
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Comment: C: xps Error in exonLevel(exonlevel, chiptype) : invalid argument ‘exonlevel’
17.5 years ago Dick Beyer ★ 1.4k
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Comment: C: xps Error in exonLevel(exonlevel, chiptype) : invalid argument ‘exonlevel’
17.5 years ago Dick Beyer ★ 1.4k
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xps Error in exonLevel(exonlevel, chiptype) : invalid argument ‘exonlevel’
ChipName affy xps ChipName affy xps
updated 17.5 years ago by ★ 3.9k • written 17.5 years ago by ★ 1.4k
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Comment: C: xps Error in exonLevel(exonlevel, chiptype) : invalid argument ‘exonlevel’
17.5 years ago Dick Beyer ★ 1.4k
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2.1k
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Comment: C: xps Error in exonLevel(exonlevel, chiptype) : invalid argument ‘exonlevel’
17.5 years ago Dick Beyer ★ 1.4k
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Answer: A: topGO and GOstats conflict
17.6 years ago Dick Beyer ★ 1.4k
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topGO and GOstats conflict
GO GOstats topGO GO GOstats topGO
17.6 years ago Dick Beyer ★ 1.4k
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Comment: C: topGO and GOstats conflict
17.6 years ago Dick Beyer ★ 1.4k
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Comment: C: unable to find known entrezgene with biomaRt
17.8 years ago Dick Beyer ★ 1.4k
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Comment: C: unable to find known entrezgene with biomaRt
17.8 years ago Dick Beyer ★ 1.4k
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6
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unable to find known entrezgene with biomaRt
biomaRt biomaRt
updated 17.8 years ago by 68k • written 17.8 years ago by ★ 1.4k
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2
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Comment: C: unable to find known entrezgene with biomaRt
17.8 years ago Dick Beyer ★ 1.4k
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2
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1.6k
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Venn Diagram for 2, 3 and 4 sets (can be extended for
GO limma GO limma
updated 18.1 years ago by ▴ 70 • written 18.1 years ago by ★ 1.4k
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Comment: C: disagreement between biomaRt and topGO
18.2 years ago Dick Beyer ★ 1.4k
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4
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2.6k
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disagreement between biomaRt and topGO
GO hgu133plus2 annotate geneplotter graph Rgraphviz PROcess goTools biomaRt Category GO
updated 18.2 years ago by ▴ 500 • written 18.2 years ago by ★ 1.4k
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