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Comment: C: using genomic DNA as universal reference
17.4 years ago Naomi Altman ★ 6.0k
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586
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Gene expression analysis
limma limma
17.4 years ago Naomi Altman ★ 6.0k
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0
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1.4k
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Answer: A: Limma design question (model interactions)
17.4 years ago Naomi Altman ★ 6.0k
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0
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1.8k
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Answer: A: limma - complex design matrix / blocks / random effects
17.4 years ago Naomi Altman ★ 6.0k
0
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0
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637
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Limma: What scenarios for converting dual channel to single channel analysis besides those in the user guide ?
17.5 years ago Naomi Altman ★ 6.0k
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0
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1.7k
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Answer: A: limma - design matrix for time series
17.5 years ago Naomi Altman ★ 6.0k
0
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0
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1.2k
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Answer: A: Agilent spike-in probes
17.6 years ago Naomi Altman ★ 6.0k
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3
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1.4k
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Factorial experiment: No degree of freedom in maanova
maanova maanova
updated 17.7 years ago by ▴ 450 • written 17.7 years ago by ★ 6.0k
0
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0
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1.1k
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Answer: A: FDR/adj.Pvalues
17.8 years ago Naomi Altman ★ 6.0k
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0
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1.1k
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Answer: A: FDR/adj.Pvalues
17.8 years ago Naomi Altman ★ 6.0k
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0
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1.0k
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2 conditions time series with different number of sample at each time point
TimeCourse limma timecourse maanova TimeCourse limma timecourse maanova
17.8 years ago Naomi Altman ★ 6.0k
0
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1
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1.6k
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Answer: A: Disorderly duplicate spots
17.8 years ago Naomi Altman ★ 6.0k
0
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0
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1.1k
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Answer: A: agilent bicolor
17.8 years ago Naomi Altman ★ 6.0k
0
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0
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660
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affy Package
oligo oligo
17.8 years ago Naomi Altman ★ 6.0k
0
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0
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1.3k
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Answer: A: different density
17.9 years ago Naomi Altman ★ 6.0k
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1
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1.3k
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Comment: C: different density
17.9 years ago Naomi Altman ★ 6.0k
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0
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1.5k
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Answer: A: Mann Whitney
17.9 years ago Naomi Altman ★ 6.0k
0
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0
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750
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Answer: A: Limma batch effect
18.0 years ago Naomi Altman ★ 6.0k
0
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0
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701
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Comment: C: optimizazion cluster in Heatmap
18.0 years ago Naomi Altman ★ 6.0k
0
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1
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2.0k
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Answer: A: RMA vs gcRMA on 2 groups of samples
18.0 years ago Naomi Altman ★ 6.0k
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1
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2.0k
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Answer: A: RMA vs gcRMA on 2 groups of samples
18.0 years ago Naomi Altman ★ 6.0k
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0
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1.3k
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Answer: A: limma - paired design
18.0 years ago Naomi Altman ★ 6.0k
0
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1
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1.3k
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Answer: A: limma - paired design
18.0 years ago Naomi Altman ★ 6.0k
0
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1
reply
1.3k
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Arabidopsis GO Pie Charts
goTools Category goTools Category
18.1 years ago Naomi Altman ★ 6.0k
0
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0
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1.3k
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Answer: A: Arabidopsis GO Pie Charts
18.1 years ago Naomi Altman ★ 6.0k
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0
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2.1k
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Comment: C: Biological replicates
18.1 years ago Naomi Altman ★ 6.0k
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0
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2.2k
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Answer: A: Extremely low p-values in limma
18.1 years ago Naomi Altman ★ 6.0k
0
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1
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2.2k
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Answer: A: Extremely low p-values in limma
18.1 years ago Naomi Altman ★ 6.0k
0
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1
reply
2.2k
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Answer: A: Extremely low p-values in limma
18.1 years ago Naomi Altman ★ 6.0k
0
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1
reply
2.0k
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Answer: A: Question on limma single-channel analysis of dual-channel microarray
18.1 years ago Naomi Altman ★ 6.0k
0
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0
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1.1k
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Comment: C: GOstat with replicates
18.1 years ago Naomi Altman ★ 6.0k
0
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3
replies
1.1k
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GOstat with replicates
updated 18.1 years ago by ★ 7.4k • written 18.1 years ago by ★ 6.0k
0
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0
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1.8k
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Answer: A: timecourse + factorial + replicates in LIMMA
18.1 years ago Naomi Altman ★ 6.0k
0
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0
replies
1.2k
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Problem when comparing a large experimental group versus a small control group by using SAM
Bayesian Bayesian
18.1 years ago Naomi Altman ★ 6.0k
0
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1
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1.8k
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Answer: A: timecourse + factorial + replicates in LIMMA
18.1 years ago Naomi Altman ★ 6.0k
0
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1
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1.9k
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Answer: A: analysis of 70 groups for differential expression
18.1 years ago Naomi Altman ★ 6.0k
0
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0
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731
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Comment: C: Problematic circular design
18.1 years ago Naomi Altman ★ 6.0k
0
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1
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1.7k
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Comment: C: problems rma() with mouse exon affy data in exonmap package
18.2 years ago Naomi Altman ★ 6.0k
0
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0
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920
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Answer: A: appropriate statistical test for post-array analysis
18.2 years ago Naomi Altman ★ 6.0k
0
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0
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663
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Answer: A: The criteria to be used in a meta-study by using SAM
18.2 years ago Naomi Altman ★ 6.0k
0
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0
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2.0k
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Answer: A: I: Two way anova or manova?
18.2 years ago Naomi Altman ★ 6.0k
0
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1
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577
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Answer: A: Help in the normalization procedures of a cDNA microarray analysis by using limm
18.4 years ago Naomi Altman ★ 6.0k
0
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0
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2.6k
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Comment: C: dealing with NAs in limma
18.4 years ago Naomi Altman ★ 6.0k
0
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1
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2.6k
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Comment: C: dealing with NAs in limma
18.4 years ago Naomi Altman ★ 6.0k
0
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2
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2.6k
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Comment: C: dealing with NAs in limma
18.4 years ago Naomi Altman ★ 6.0k
0
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0
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818
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Answer: A: removeing or filtering data
18.4 years ago Naomi Altman ★ 6.0k
0
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2
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5.8k
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Answer: A: How to do clustering
18.4 years ago Naomi Altman ★ 6.0k
0
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1
reply
891
views
Answer: A: Agilent's duplicate spots
18.4 years ago Naomi Altman ★ 6.0k
0
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0
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639
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Answer: A: must one test all that is included in normalization?
18.4 years ago Naomi Altman ★ 6.0k
0
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2
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1.4k
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Can subject be treated as fixed effect in linear model with microarray data
Microarray limma Microarray limma
updated 18.4 years ago by ▴ 20 • written 18.4 years ago by ★ 6.0k
601 results • Page 5 of 13
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