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5
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2
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7.8k
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Anova; can I use lmFit and eBayes from Limma, or should it be aov?
limma
updated 11.0 years ago by 53k • written 13.0 years ago by ▴ 560
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Comment: A: Anova; can I use lmFit and eBayes from Limma, or should it be aov?
updated 11.0 years ago by 53k • written 13.0 years ago by ▴ 560
0
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0
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40k
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Comment: C: edgeR warnings and then error
13.0 years ago john herbert ▴ 560
0
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2
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40k
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Comment: C: edgeR warnings and then error
13.0 years ago john herbert ▴ 560
0
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1
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40k
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Comment: C: edgeR warnings and then error
13.0 years ago john herbert ▴ 560
0
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1
reply
40k
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Comment: C: edgeR warnings and then error
13.0 years ago john herbert ▴ 560
0
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0
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40k
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Comment: C: edgeR warnings and then error
13.0 years ago john herbert ▴ 560
0
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10
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40k
views
edgeR warnings and then error
edgeR edgeR
written 13.0 years ago by ▴ 560
0
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0
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40k
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Answer: A: edgeR warnings and then error
13.0 years ago john herbert ▴ 560
0
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2
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2.5k
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Comment: C: Limma; a kind of extended paired analyses with or without treatment
13.1 years ago john herbert ▴ 560
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0
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2.5k
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Comment: C: Limma; a kind of extended paired analyses with or without treatment
13.1 years ago john herbert ▴ 560
0
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0
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2.5k
views
Comment: C: Limma; a kind of extended paired analyses with or without treatment
13.1 years ago john herbert ▴ 560
0
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2
replies
2.5k
views
Comment: C: Limma; a kind of extended paired analyses with or without treatment
13.1 years ago john herbert ▴ 560
0
votes
0
replies
2.5k
views
Comment: C: Limma; a kind of extended paired analyses with or without treatment
13.1 years ago john herbert ▴ 560
0
votes
2
replies
2.5k
views
Comment: C: Limma; a kind of extended paired analyses with or without treatment
13.1 years ago john herbert ▴ 560
0
votes
2
replies
2.5k
views
Answer: A: Limma; a kind of extended paired analyses with or without treatment
13.1 years ago john herbert ▴ 560
0
votes
13
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2.5k
views
Limma; a kind of extended paired analyses with or without treatment
Cancer Cancer
13.1 years ago john herbert ▴ 560
0
votes
1
reply
9.1k
views
Comment: C: Limma topTable; fold changes look completely different to the normalized data an
13.4 years ago john herbert ▴ 560
0
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1
reply
9.1k
views
Comment: C: Limma topTable; fold changes look completely different to the normalized data an
13.4 years ago john herbert ▴ 560
0
votes
5
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9.1k
views
Limma topTable; fold changes look completely different to the normalized data and Limma fold change
limma limma
13.4 years ago john herbert ▴ 560
0
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1
reply
9.1k
views
Answer: A: Limma topTable; fold changes look completely different to the normalized data an
13.4 years ago john herbert ▴ 560
0
votes
3
replies
1.5k
views
Limma analyses;paired and/or factorial design?
updated 13.5 years ago by 53k • written 13.5 years ago by ▴ 560
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0
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2.1k
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Answer: A: CummeRbund Error
13.8 years ago john herbert ▴ 560
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4
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2.1k
views
CummeRbund Error
cummeRbund cummeRbund
13.8 years ago john herbert ▴ 560
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1
reply
2.1k
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Comment: C: CummeRbund Error
13.8 years ago john herbert ▴ 560
0
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0
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10k
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Comment: C: Error while building ExpressionSet from scratch....
14.0 years ago john herbert ▴ 560
0
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1
reply
1.5k
views
Two channel data vs. one colour data for PCA, heatmaps and clustering
14.0 years ago john herbert ▴ 560
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0
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1.5k
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Answer: A: Two channel data vs. one colour data for PCA, heatmaps and clustering
14.0 years ago john herbert ▴ 560
0
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0
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2.0k
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Comment: C: Two channel data vs. one colour data for PCA, heatmaps and clustering
14.0 years ago john herbert ▴ 560
0
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0
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2.1k
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Comment: C: Limma model parameters design, combining a paired with a factorial design
14.1 years ago john herbert ▴ 560
1
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2
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2.1k
views
Limma model parameters design, combining a paired with a factorial design
limma limma
updated 14.1 years ago by 68k • written 14.1 years ago by ▴ 560
0
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0
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8.6k
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Comment: C: heatmap.2 function and the scale option
14.1 years ago john herbert ▴ 560
0
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2
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8.6k
views
heatmap.2 function and the scale option
Microarray Clustering Microarray Clustering
updated 14.1 years ago by ▴ 80 • written 14.1 years ago by ▴ 560
0
votes
4
replies
1.8k
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Array data vs. Next Gen with log 2 Fold Change
RNASeq Microarray limma RNASeq Microarray limma
updated 14.3 years ago by 53k • written 14.3 years ago by ▴ 560
0
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0
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1.8k
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Comment: C: Array data vs. Next Gen with log 2 Fold Change
14.3 years ago john herbert ▴ 560
0
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1
reply
1.8k
views
Comment: C: Array data vs. Next Gen with log 2 Fold Change
14.3 years ago john herbert ▴ 560
0
votes
1
reply
2.1k
views
Log2 fold change single replicate RNA seq
RNASeq Microarray limma RNASeq Microarray limma
updated 14.3 years ago by ★ 7.2k • written 14.3 years ago by ▴ 560
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0
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1.8k
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Answer: A: Array data vs. Next Gen with log 2 Fold Change
14.3 years ago john herbert ▴ 560
0
votes
1
reply
3.5k
views
Answer: A: Limma; matrix of microarray data and design matrix
14.4 years ago john herbert ▴ 560
0
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3
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3.5k
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Limma; matrix of microarray data and design matrix
limma limma
14.4 years ago john herbert ▴ 560
0
votes
2
replies
1.3k
views
Log intensity plots with colours
limma limma
14.5 years ago john herbert ▴ 560
0
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0
replies
1.3k
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Answer: A: Log intensity plots with colours
14.5 years ago john herbert ▴ 560
0
votes
1
reply
1.1k
views
log intensity plots with colours
limma limma
updated 14.5 years ago by 21k • written 14.5 years ago by ▴ 560
0
votes
1
reply
939
views
Agilent Mouse annotation and using methods of AnnotationDbi
Annotation Annotation
updated 14.5 years ago by ★ 7.2k • written 14.5 years ago by ▴ 560
0
votes
1
reply
1.8k
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HTqPCR reading data
updated 14.5 years ago by ★ 2.0k • written 14.5 years ago by ▴ 560
0
votes
1
reply
3.5k
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Comment: C: Delta CT data distribution and cluster analyses; machine learning or other
14.5 years ago john herbert ▴ 560
0
votes
1
reply
3.5k
views
Comment: C: Delta CT data distribution and cluster analyses; machine learning or other
14.5 years ago john herbert ▴ 560
0
votes
8
replies
3.5k
views
Delta CT data distribution and cluster analyses; machine learning or other
Microarray Microarray
updated 14.5 years ago by ★ 2.0k • written 14.5 years ago by ▴ 560
0
votes
0
replies
1.6k
views
Answer: A: Heatmaps and correlation
14.5 years ago john herbert ▴ 560
0
votes
0
replies
1.6k
views
Answer: A: Heatmaps and correlation
14.5 years ago john herbert ▴ 560
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