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5
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Anova; can I use lmFit and eBayes from Limma, or should it be aov?
limma
updated 9.4 years ago by 50k • written 11.4 years ago by ▴ 560
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Comment: A: Anova; can I use lmFit and eBayes from Limma, or should it be aov?
updated 9.4 years ago by 50k • written 11.4 years ago by ▴ 560
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13k
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Comment: C: edgeR warnings and then error
11.4 years ago john herbert ▴ 560
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2
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13k
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Comment: C: edgeR warnings and then error
11.4 years ago john herbert ▴ 560
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1
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13k
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Comment: C: edgeR warnings and then error
11.4 years ago john herbert ▴ 560
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1
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13k
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Comment: C: edgeR warnings and then error
11.4 years ago john herbert ▴ 560
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13k
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Comment: C: edgeR warnings and then error
11.4 years ago john herbert ▴ 560
0
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9
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13k
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edgeR warnings and then error
edgeR edgeR
updated 11.4 years ago by 50k • written 11.4 years ago by ▴ 560
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13k
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Answer: A: edgeR warnings and then error
11.4 years ago john herbert ▴ 560
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1.8k
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Comment: C: Limma; a kind of extended paired analyses with or without treatment
11.5 years ago john herbert ▴ 560
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2
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1.8k
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Comment: C: Limma; a kind of extended paired analyses with or without treatment
11.5 years ago john herbert ▴ 560
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0
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1.8k
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Comment: C: Limma; a kind of extended paired analyses with or without treatment
11.5 years ago john herbert ▴ 560
0
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2
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1.8k
views
Comment: C: Limma; a kind of extended paired analyses with or without treatment
11.5 years ago john herbert ▴ 560
0
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2
replies
1.8k
views
Comment: C: Limma; a kind of extended paired analyses with or without treatment
11.5 years ago john herbert ▴ 560
0
votes
0
replies
1.8k
views
Comment: C: Limma; a kind of extended paired analyses with or without treatment
11.5 years ago john herbert ▴ 560
0
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2
replies
1.8k
views
Answer: A: Limma; a kind of extended paired analyses with or without treatment
11.5 years ago john herbert ▴ 560
0
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13
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1.8k
views
Limma; a kind of extended paired analyses with or without treatment
Cancer Cancer
11.5 years ago john herbert ▴ 560
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1
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8.3k
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Comment: C: Limma topTable; fold changes look completely different to the normalized data an
11.8 years ago john herbert ▴ 560
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1
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8.3k
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Comment: C: Limma topTable; fold changes look completely different to the normalized data an
11.8 years ago john herbert ▴ 560
0
votes
1
reply
8.3k
views
Answer: A: Limma topTable; fold changes look completely different to the normalized data an
11.8 years ago john herbert ▴ 560
0
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5
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8.3k
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Limma topTable; fold changes look completely different to the normalized data and Limma fold change
limma limma
11.8 years ago john herbert ▴ 560
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3
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1.2k
views
Limma analyses;paired and/or factorial design?
updated 12.0 years ago by 50k • written 12.0 years ago by ▴ 560
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0
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1.7k
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Answer: A: CummeRbund Error
12.3 years ago john herbert ▴ 560
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4
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1.7k
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CummeRbund Error
cummeRbund cummeRbund
12.3 years ago john herbert ▴ 560
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1
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1.7k
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Comment: C: CummeRbund Error
12.3 years ago john herbert ▴ 560
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0
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9.2k
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Comment: C: Error while building ExpressionSet from scratch....
12.4 years ago john herbert ▴ 560
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1
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1.3k
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Two channel data vs. one colour data for PCA, heatmaps and clustering
12.4 years ago john herbert ▴ 560
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0
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1.3k
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Answer: A: Two channel data vs. one colour data for PCA, heatmaps and clustering
12.4 years ago john herbert ▴ 560
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0
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1.5k
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Comment: C: Two channel data vs. one colour data for PCA, heatmaps and clustering
12.4 years ago john herbert ▴ 560
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0
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1.8k
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Comment: C: Limma model parameters design, combining a paired with a factorial design
12.5 years ago john herbert ▴ 560
1
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2
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1.8k
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Limma model parameters design, combining a paired with a factorial design
limma limma
updated 12.5 years ago by 65k • written 12.5 years ago by ▴ 560
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0
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8.0k
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Comment: C: heatmap.2 function and the scale option
12.5 years ago john herbert ▴ 560
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2
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8.0k
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heatmap.2 function and the scale option
Microarray Clustering Microarray Clustering
updated 12.5 years ago by ▴ 80 • written 12.6 years ago by ▴ 560
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4
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1.5k
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Array data vs. Next Gen with log 2 Fold Change
RNASeq Microarray limma RNASeq Microarray limma
updated 12.8 years ago by 50k • written 12.8 years ago by ▴ 560
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1.5k
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Comment: C: Array data vs. Next Gen with log 2 Fold Change
12.8 years ago john herbert ▴ 560
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1
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1.5k
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Comment: C: Array data vs. Next Gen with log 2 Fold Change
12.8 years ago john herbert ▴ 560
0
votes
1
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1.8k
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Log2 fold change single replicate RNA seq
RNASeq Microarray limma RNASeq Microarray limma
updated 12.8 years ago by ★ 7.2k • written 12.8 years ago by ▴ 560
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0
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1.5k
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Answer: A: Array data vs. Next Gen with log 2 Fold Change
12.8 years ago john herbert ▴ 560
0
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3
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3.2k
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Limma; matrix of microarray data and design matrix
limma limma
12.9 years ago john herbert ▴ 560
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1
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3.2k
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Answer: A: Limma; matrix of microarray data and design matrix
12.9 years ago john herbert ▴ 560
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0
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1.0k
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Answer: A: Log intensity plots with colours
12.9 years ago john herbert ▴ 560
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2
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1.0k
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Log intensity plots with colours
limma limma
12.9 years ago john herbert ▴ 560
0
votes
1
reply
851
views
log intensity plots with colours
limma limma
updated 12.9 years ago by 21k • written 12.9 years ago by ▴ 560
0
votes
1
reply
795
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Agilent Mouse annotation and using methods of AnnotationDbi
Annotation Annotation
updated 12.9 years ago by ★ 7.2k • written 12.9 years ago by ▴ 560
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1
reply
1.5k
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HTqPCR reading data
updated 12.9 years ago by ★ 2.0k • written 13.0 years ago by ▴ 560
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1
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2.7k
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Comment: C: Delta CT data distribution and cluster analyses; machine learning or other
12.9 years ago john herbert ▴ 560
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1
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2.7k
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Comment: C: Delta CT data distribution and cluster analyses; machine learning or other
12.9 years ago john herbert ▴ 560
0
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8
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2.7k
views
Delta CT data distribution and cluster analyses; machine learning or other
Microarray Microarray
updated 12.9 years ago by ★ 2.0k • written 12.9 years ago by ▴ 560
0
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0
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1.2k
views
Answer: A: Heatmaps and correlation
13.0 years ago john herbert ▴ 560
0
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4
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1.2k
views
Heatmaps and correlation
13.0 years ago john herbert ▴ 560
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