Biostar Tutorial

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Tutorial annotation

updated 3 months ago by Kevin Blighe 3.4k • written 2.5 years ago by prodhan82 ▴ 20

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6.6 years ago • updated 6 months ago Sean Davis 21k

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tutorial DESeq2 pasilla

11 months ago Carina • 0

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623

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15 months ago Johannes Rainer ★ 1.9k

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limma deseq2 Tutorial

updated 16 months ago by Gordon Smyth 44k • written 16 months ago by yuemolinn • 0

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250

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tximport Cufflink Tutorial

updated 16 months ago by Kevin Blighe 3.4k • written 16 months ago by LeiaMax2020 • 0

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192

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updated 17 months ago by Kevin Blighe 3.4k • written 17 months ago by taniachavarria79 • 0

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updated 17 months ago by Kevin Blighe 3.4k • written 17 months ago by adR ▴ 10

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279

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updated 19 months ago by Aaron Lun ★ 27k • written 19 months ago by tiphaine.martin • 0

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187

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updated 20 months ago by Michael Love 35k • written 20 months ago by Anna.bramucci • 0

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659

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updated 21 months ago by Laurent Gatto 1.5k • written 21 months ago by Leonardo Collado Torres ▴ 950

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updated 21 months ago by Zuguang Gu ▴ 220 • written 21 months ago by AR3513 • 0

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21 months ago Michael Love 35k

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431

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updated 4 months ago by rohitsatyam102 ▴ 20 • written 22 months ago by tmvarsha ▴ 20

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633

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updated 22 months ago by Michael Love 35k • written 22 months ago by Nas 1989 • 0

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updated 22 months ago by James W. MacDonald 58k • written 22 months ago by Ni-Ar ▴ 10

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R 3.6.2 update problems with igraph and phangorn update Phyloseq igraph phangorn Tutorial

updated 2.1 years ago by Martin Morgan 25k • written 2.1 years ago by crgarcia • 0

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updated 11 months ago by Samuel Daniel • 0 • written 2.3 years ago by rajeshparmar4 ▴ 10

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updated 2.4 years ago by shepherl 2.9k • written 2.4 years ago by shokoohi • 0

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2.4 years ago 444579004 • 0

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379

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updated 2.4 years ago by Martin Morgan 25k • written 2.4 years ago by trumbia • 0

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updated 2.5 years ago by Laurent Gatto 1.5k • written 2.5 years ago by naeemurself • 0

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813

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updated 2.5 years ago by Yuan Tian ▴ 240 • written 2.6 years ago by learning.iq84 • 0

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875

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updated 2.6 years ago by Martin Morgan 25k • written 2.6 years ago by vedbar • 0

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758

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updated 2.6 years ago by Steve Lianoglou 13k • written 2.6 years ago by mbasam • 0

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823

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clusterProfiler font size Tutorial

updated 2.7 years ago by Gordon Smyth 44k • written 2.7 years ago by bony.dekumar • 0

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769

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BioMart downloading reference genome alignment Tutorial

2.8 years ago jcollidelcs • 0

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554

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deseq2 limma edger Tutorial

updated 2.9 years ago by Michael Love 35k • written 2.9 years ago by wwu222 • 0

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4.8k

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updated 2.9 years ago by lisaolley91 • 0 • written 3.0 years ago by shepherl 2.9k

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862

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2.9 years ago lalchungnungabt17 • 0

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572

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3.0 years ago S.Webb6 ▴ 40

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677

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updated 3.3 years ago by Martin Morgan 25k • written 3.3 years ago by pltbiotech_tkarthi • 0

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513

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updated 3.3 years ago by Michael Love 35k • written 3.3 years ago by Stanley Yang • 0

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578

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GSVA tutorial

updated 3.4 years ago by Robert Castelo ★ 2.8k • written 3.4 years ago by owen.whitley • 0

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985

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edger Tutorial

updated 3.4 years ago by Hotz, Hans-Rudolf ▴ 400 • written 3.4 years ago by ilovesuperheroes1993 • 0

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600

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updated 3.4 years ago by Gordon Smyth 44k • written 3.4 years ago by Juan • 0

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811

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limma normalization Tutorial

updated 3.5 years ago by James W. MacDonald 58k • written 3.5 years ago by devarajsaranya • 0

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1.0k

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3.6 years ago t.kuilman 170

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tximport Tutorial

updated 3.7 years ago by Steve Lianoglou 13k • written 3.7 years ago by nelson.s.garcia ▴ 10

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deseq2 Tutorial

3.8 years ago krwyaong.ju • 0

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830

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ChAMP tutorial

3.8 years ago Dave Emir • 0

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859

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updated 3.8 years ago by James W. MacDonald 58k • written 3.8 years ago by anokhi1997 • 0

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mooc Tutorial

updated 3.8 years ago by ifmrdatascience • 0 • written 6.4 years ago by Kasper Daniel Hansen 6.5k

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R GEO geoquery geoquery error message Tutorial

4.0 years ago martinguerrerog89 ▴ 20

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methylkit Tutorial

updated 4.2 years ago by Martin Morgan 25k • written 4.2 years ago by s1432985 • 0

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702

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updated 4.2 years ago by Gordon Smyth 44k • written 4.2 years ago by mariamari693693 • 0

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917

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updated 4.3 years ago by Martin Morgan 25k • written 4.3 years ago by ahmed.elewa ▴ 20

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1.2k

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pathview korg subscript out of bounds Tutorial

updated 4.3 years ago by Luo Weijun ★ 1.5k • written 4.4 years ago by aacevedo • 0

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subversion bioc-devel package development usedevel Tutorial

4.5 years ago Bohdan Khomtchouk ▴ 10

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2.6k

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public data TCGA GTEx Tutorial

4.5 years ago shepherl 2.9k

50 results • Page 1 of 1

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Comment: DiffBind dba.count Error in if (sum(tokeep) < length(tokeep)) by tjhwangxiong • 0

``` https://drive.google.com/drive/folders/1787thVatZpt_KFrfXY-aXV1m0FRm8Mhm?usp=sharing ``` Thanks for your reply. I have uploaded the fil…

Comment: Trying to follow a gene set analyisis in R by Michael Love 35k

No I can’t help with exercises. Just to be clear I’m not affiliated with Harvard and have no supported effort in relation to the edx classe…

Answer: Problems to find the pvalues via rowttests by Gordon Smyth 44k

Ordinary t-tests aren't recommended for genomic analyses because they have poor power and higher false discovery rates. Using the limma p…

Answer: How to insert a qvalues column in a dataframe with pvalues in R by Gordon Smyth 44k

Here and in a previous post, it seems you're not using recommended Bioconductor workflows for Affymetrix microarrays. If you used a standar…

Comment: Trying to follow a gene set analyisis in R by leonardorosas2001 • 0

Thank you. I hope I can still let you know if I have issues with your exercises. They are very challenging but useful! :)

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Answer: Problems to find the pvalues via rowttests

A: How to use subSeq with DNAStringSet and information of GroupedIRanges?

Annotating GRanges with TxDb gene models using plyranges

plyranges select() when a metadata column is shared with core variable

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