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875
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Differentially regulated genes
BRAIN BRAIN
12.1 years ago Ali Mohammadian ▴ 290
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733
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elementary question about statistical comparing of standard deviations, pls help
12.6 years ago Ali Mohammadian ▴ 290
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0
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856
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Answer: A: Plausibilty of application of "modified LOESS normalization" to single channel ar
12.6 years ago Ali Mohammadian ▴ 290
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1
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856
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Plausibilty of application of "modified LOESS normalization" to single channel arrays
12.6 years ago Ali Mohammadian ▴ 290
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1
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2.9k
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HT qPCR; Creating qPCRset from expression matrix
updated 12.6 years ago by ★ 2.0k • written 12.6 years ago by ▴ 290
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0
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695
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Linearity of "Scale rank invariant set" and "geometric mean" of normalizeCtData {HTqPCR}
12.6 years ago Ali Mohammadian ▴ 290
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0
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1.0k
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Help with choice of normalization
Microarray Normalization GO microRNA Microarray Normalization GO microRNA
12.7 years ago Ali Mohammadian ▴ 290
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1
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1.1k
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Normalization of array leads to decrease in number of differentially expressed genes
qPCR Normalization qPCR Normalization
updated 12.7 years ago by ▴ 430 • written 12.7 years ago by ▴ 290
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1
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766
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Newbie. quantile normalization should be done on all conditions or within replicates of each condition?
Normalization Normalization
updated 12.8 years ago by 68k • written 12.8 years ago by ▴ 290
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0
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746
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Pooling of samples for array
12.9 years ago Ali Mohammadian ▴ 290
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0
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1.1k
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PLS help: is it sound to normalized highthrouput qPCR arrays using vsn?
qPCR Normalization vsn qPCR Normalization vsn
12.9 years ago Ali Mohammadian ▴ 290
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1
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963
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all miRNAs related to a specific keyword, such as glioblastoma
updated 13.0 years ago by ▴ 610 • written 13.0 years ago by ▴ 290
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1
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986
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plausibility of cyclic loess normalization on multiple experiment
Normalization Normalization
updated 13.0 years ago by ▴ 260 • written 13.0 years ago by ▴ 290
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1
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1.0k
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HTqPCR: normalizeCtData
updated 13.0 years ago by ★ 2.0k • written 13.0 years ago by ▴ 290
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3
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797
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How to choose the most 2 different samples in an array experiment
updated 13.0 years ago by ▴ 740 • written 13.0 years ago by ▴ 290
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1
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829
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question from any of TopGO, gage, sigpathway, GSVA, GOstat users
miRNA Pathways miRNA Pathways
updated 13.1 years ago by ★ 13k • written 13.1 years ago by ▴ 290
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0
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867
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Any code for simulation of qPCR studies?
qPCR qPCR
13.1 years ago Ali Mohammadian ▴ 290
0
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1
reply
937
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clusterCt {HTqPCR}
qPCR qPCR
updated 13.1 years ago by ★ 2.0k • written 13.1 years ago by ▴ 290
0
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1
reply
643
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normalize.invariantset
updated 13.1 years ago by 68k • written 13.1 years ago by ▴ 290
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1
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1.5k
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impute.knn
impute impute
updated 13.1 years ago by ★ 4.2k • written 13.1 years ago by ▴ 290
1
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1
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2.6k
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miRNA- KEGG
Pathways Pathways
updated 13.1 years ago by ▴ 610 • written 13.1 years ago by ▴ 290
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2
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1.0k
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how split a matrix
updated 13.1 years ago by 25k • written 13.1 years ago by ▴ 290
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1
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638
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Gettin Expressions back from MA.List
updated 13.1 years ago by ▴ 430 • written 13.1 years ago by ▴ 290
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1
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681
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Red line in MAplots, is it lowess or smooth.spline?
updated 13.1 years ago by ★ 13k • written 13.1 years ago by ▴ 290
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1
reply
818
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LVSmiRNA for EList,
updated 13.2 years ago by ▴ 90 • written 13.2 years ago by ▴ 290
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0
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1.0k
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Comment: C: MA plot for highthrouput qPCR array, shows bias?
13.3 years ago Ali Mohammadian ▴ 290
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2
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1.0k
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MA plot for highthrouput qPCR array, shows bias?
updated 13.3 years ago by ★ 2.0k • written 13.3 years ago by ▴ 290
0
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0
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586
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normalize.invariantset(data, ref, prd.td=c(0.003,0.007))
13.3 years ago Ali Mohammadian ▴ 290
0
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0
replies
712
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MA plot for highthrouput qPCR assay
qPCR qPCR
13.3 years ago Ali Mohammadian ▴ 290
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