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It works! RE: So close, but still error: RE: Rsamtools filtering bam file: RE: MEDIPS.createSet error
Alignment GO Cancer BSgenome BSgenome Rsamtools genomes MEDIPS Alignment GO Cancer
updated 10.0 years ago by ▴ 570 • written 10.1 years ago by ▴ 220
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So close, but still error: RE: Rsamtools filtering bam file: RE: MEDIPS.createSet error
Alignment GO Cancer BSgenome BSgenome Rsamtools genomes MEDIPS Alignment GO Cancer
updated 10.1 years ago by ▴ 570 • written 10.1 years ago by ▴ 220
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Comment: C: Rsamtools filtering bam file: RE: MEDIPS.createSet error
10.1 years ago Vining, Kelly ▴ 220
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Comment: C: MEDIPS.createSet error
10.1 years ago Vining, Kelly ▴ 220
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Rsamtools filtering bam file: RE: MEDIPS.createSet error
GO BSgenome BSgenome Rsamtools genomes MEDIPS GO BSgenome BSgenome Rsamtools genomes
updated 10.1 years ago by 25k • written 10.1 years ago by ▴ 220
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MEDIPS.createSet error
BSgenome BSgenome Rsamtools MEDIPS BSgenome BSgenome Rsamtools MEDIPS
updated 10.1 years ago by ▴ 570 • written 10.1 years ago by ▴ 220
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Comment: C: MEDIPS.createSet error
10.1 years ago Vining, Kelly ▴ 220
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Comment: C: MEDIPS.createSet error
10.1 years ago Vining, Kelly ▴ 220
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MEDIPS.createSet error
Alignment BSgenome BSgenome MEDIPS Alignment BSgenome BSgenome MEDIPS
updated 10.1 years ago by ▴ 570 • written 10.1 years ago by ▴ 220
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Comment: C: Aha: different error may be a clue: RE: separate MEDIPS.createSet required for e
10.4 years ago Vining, Kelly ▴ 220
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Comment: C: separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome
10.4 years ago Vining, Kelly ▴ 220
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Comment: C: separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome
10.4 years ago Vining, Kelly ▴ 220
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Answer: A: separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome
10.4 years ago Vining, Kelly ▴ 220
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Aha: different error may be a clue: RE: separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome with MEDIPS
Alignment BSgenome safe BSgenome MEDIPS Alignment BSgenome safe BSgenome MEDIPS
updated 10.4 years ago by ▴ 570 • written 10.4 years ago by ▴ 220
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6
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separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome with MEDIPS
Alignment BSgenome safe BSgenome MEDIPS Alignment BSgenome safe BSgenome MEDIPS
updated 10.4 years ago by ▴ 570 • written 10.4 years ago by ▴ 220
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3
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separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome with MEDIPS
BSgenome BSgenome MEDIPS BSgenome BSgenome MEDIPS
updated 10.4 years ago by ▴ 570 • written 10.4 years ago by ▴ 220
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It works: RE: using custom BSgenome with MEDIPS
BSgenome BSgenome MEDIPS BSgenome BSgenome MEDIPS
10.4 years ago Vining, Kelly ▴ 220
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1
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1.2k
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using custom BSgenome with MEDIPS
BSgenome BSgenome MEDIPS BSgenome BSgenome MEDIPS
updated 10.4 years ago by ▴ 570 • written 10.4 years ago by ▴ 220
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1.1k
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Comment: C: Question about MEDIPS extend parameter
10.4 years ago Vining, Kelly ▴ 220
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1.1k
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Question about MEDIPS extend parameter
updated 10.4 years ago by ▴ 570 • written 10.4 years ago by ▴ 220
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975
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Comment: C: BSgenomeForge seed file - seqnames field
11.0 years ago Vining, Kelly ▴ 220
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706
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MEDIPS R package reference genomes
genomes MEDIPS genomes MEDIPS
updated 12.3 years ago by ★ 6.8k • written 12.3 years ago by ▴ 220
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