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It works! RE: So close, but still error: RE: Rsamtools filtering bam file: RE: MEDIPS.createSet error
Alignment GO Cancer BSgenome BSgenome Rsamtools genomes MEDIPS Alignment GO Cancer
updated 11.6 years ago by ▴ 570 • written 11.7 years ago by ▴ 220
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So close, but still error: RE: Rsamtools filtering bam file: RE: MEDIPS.createSet error
Alignment GO Cancer BSgenome BSgenome Rsamtools genomes MEDIPS Alignment GO Cancer
updated 11.7 years ago by ▴ 570 • written 11.7 years ago by ▴ 220
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Comment: C: Rsamtools filtering bam file: RE: MEDIPS.createSet error
11.7 years ago Vining, Kelly ▴ 220
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Comment: C: MEDIPS.createSet error
11.7 years ago Vining, Kelly ▴ 220
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Rsamtools filtering bam file: RE: MEDIPS.createSet error
GO BSgenome BSgenome Rsamtools genomes MEDIPS GO BSgenome BSgenome Rsamtools genomes
updated 11.7 years ago by 25k • written 11.7 years ago by ▴ 220
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MEDIPS.createSet error
BSgenome BSgenome Rsamtools MEDIPS BSgenome BSgenome Rsamtools MEDIPS
updated 11.7 years ago by ▴ 570 • written 11.7 years ago by ▴ 220
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Comment: C: MEDIPS.createSet error
11.7 years ago Vining, Kelly ▴ 220
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Comment: C: MEDIPS.createSet error
11.7 years ago Vining, Kelly ▴ 220
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MEDIPS.createSet error
Alignment BSgenome BSgenome MEDIPS Alignment BSgenome BSgenome MEDIPS
updated 11.7 years ago by ▴ 570 • written 11.7 years ago by ▴ 220
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Comment: C: Aha: different error may be a clue: RE: separate MEDIPS.createSet required for e
11.9 years ago Vining, Kelly ▴ 220
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Comment: C: separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome
11.9 years ago Vining, Kelly ▴ 220
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Comment: C: separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome
11.9 years ago Vining, Kelly ▴ 220
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Answer: A: separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome
11.9 years ago Vining, Kelly ▴ 220
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Aha: different error may be a clue: RE: separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome with MEDIPS
Alignment BSgenome safe BSgenome MEDIPS Alignment BSgenome safe BSgenome MEDIPS
updated 11.9 years ago by ▴ 570 • written 11.9 years ago by ▴ 220
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6
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separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome with MEDIPS
Alignment BSgenome safe BSgenome MEDIPS Alignment BSgenome safe BSgenome MEDIPS
updated 11.9 years ago by ▴ 570 • written 11.9 years ago by ▴ 220
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3
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separate MEDIPS.createSet required for each replicate? RE: using custom BSgenome with MEDIPS
BSgenome BSgenome MEDIPS BSgenome BSgenome MEDIPS
updated 11.9 years ago by ▴ 570 • written 11.9 years ago by ▴ 220
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It works: RE: using custom BSgenome with MEDIPS
BSgenome BSgenome MEDIPS BSgenome BSgenome MEDIPS
12.0 years ago Vining, Kelly ▴ 220
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1.5k
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using custom BSgenome with MEDIPS
BSgenome BSgenome MEDIPS BSgenome BSgenome MEDIPS
updated 12.0 years ago by ▴ 570 • written 12.0 years ago by ▴ 220
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1.3k
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Comment: C: Question about MEDIPS extend parameter
12.0 years ago Vining, Kelly ▴ 220
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1.3k
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Question about MEDIPS extend parameter
updated 12.0 years ago by ▴ 570 • written 12.0 years ago by ▴ 220
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1.2k
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Comment: C: BSgenomeForge seed file - seqnames field
12.6 years ago Vining, Kelly ▴ 220
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909
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MEDIPS R package reference genomes
genomes MEDIPS genomes MEDIPS
updated 13.9 years ago by ★ 6.8k • written 13.9 years ago by ▴ 220
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