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edgeR 4 conditions
edger
8.5 years ago Paolo Kunderfranco ▴ 350
0
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1
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1.3k
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Comment: C: edgeR two conditions two diet treatment
8.5 years ago Paolo Kunderfranco ▴ 350
0
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1
reply
2.0k
views
ChIPpeakAnno
annotate ChIPpeakAnno annotate ChIPpeakAnno
updated 11.6 years ago by ★ 4.3k • written 11.6 years ago by ▴ 350
0
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2
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1.4k
views
lumi - limma contrast design
Cancer Cancer
updated 11.6 years ago by ★ 1.1k • written 11.6 years ago by ▴ 350
0
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0
replies
1.9k
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EximiR - Limma - miRCURY LNA - Exiqon
miRNA Microarray Cancer limma lumi ExiMiR miRNA Microarray Cancer limma lumi ExiMiR
11.9 years ago Paolo Kunderfranco ▴ 350
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0
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1.6k
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Comment: C: MEDIPS
12.2 years ago Paolo Kunderfranco ▴ 350
0
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2
replies
1.6k
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MEDIPS
Coverage MEDIPS Coverage MEDIPS
updated 12.2 years ago by ▴ 570 • written 12.2 years ago by ▴ 350
0
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1
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2.8k
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DiffBind - error dba-count
DiffBind DiffBind
updated 12.6 years ago by ★ 5.2k • written 12.6 years ago by ▴ 350
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1
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1.4k
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MEDIPS
Sequencing Alignment MEDIPS Sequencing Alignment MEDIPS
updated 12.7 years ago by ▴ 570 • written 12.7 years ago by ▴ 350
4
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2
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1.8k
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MEDIPS
MEDIPS MEDIPS
12.8 years ago Paolo Kunderfranco ▴ 350
2
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1
reply
1.8k
views
Answer: A: MEDIPS
12.8 years ago Paolo Kunderfranco ▴ 350
0
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0
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2.9k
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Comment: C: ggplots2 - heatmap2 colour labels
13.2 years ago Paolo Kunderfranco ▴ 350
0
votes
2
replies
2.9k
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ggplots2 - heatmap2 colour labels
updated 13.2 years ago by 68k • written 13.2 years ago by ▴ 350
0
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0
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1.1k
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heatmap.2
13.2 years ago Paolo Kunderfranco ▴ 350
0
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1
reply
3.5k
views
DiffBind - overlap between different peak callers
DiffBind DiffBind
updated 13.2 years ago by ▴ 100 • written 13.2 years ago by ▴ 350
0
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2
replies
5.1k
views
DiffBind - sample sheet for multiple replicates and peak
updated 13.2 years ago by ▴ 100 • written 13.2 years ago by ▴ 350
0
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1
reply
1.6k
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Comment: C: #Identify differentially expressed genes
13.3 years ago Paolo Kunderfranco ▴ 350
0
votes
1
reply
1.1k
views
lumi - Heatmap
lumi lumi
updated 13.3 years ago by 21k • written 13.3 years ago by ▴ 350
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4
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1.6k
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#Identify differentially expressed genes
limma lumi limma lumi
updated 13.3 years ago by 53k • written 13.3 years ago by ▴ 350
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0
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2.1k
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Comment: C: DiffBind - overlap between different peak callers
13.3 years ago Paolo Kunderfranco ▴ 350
0
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1
reply
2.1k
views
Comment: C: DiffBind - overlap between different peak callers
13.3 years ago Paolo Kunderfranco ▴ 350
0
votes
1
reply
2.1k
views
Answer: A: DiffBind - overlap between different peak callers
13.3 years ago Paolo Kunderfranco ▴ 350
0
votes
4
replies
2.1k
views
DiffBind - overlap between different peak callers
CMA DiffBind CMA DiffBind
13.3 years ago Paolo Kunderfranco ▴ 350
0
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0
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1.1k
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lumi - limma - geneSymbol and geneName N/A
limma lumi limma lumi
13.4 years ago Paolo Kunderfranco ▴ 350
0
votes
1
reply
1.3k
views
DiffBind error loading dba.count
Cancer CMA DiffBind Cancer CMA DiffBind
updated 13.4 years ago by ▴ 70 • written 13.4 years ago by ▴ 350
0
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1
reply
1.4k
views
DiffBind error loading dba.count
CMA DiffBind CMA DiffBind
updated 13.4 years ago by ▴ 70 • written 13.4 years ago by ▴ 350
0
votes
1
reply
1.0k
views
lumi - limma - geneSymbol/geneName
limma lumi limma lumi
updated 13.4 years ago by ★ 7.2k • written 13.4 years ago by ▴ 350
0
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0
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2.2k
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Comment: C: ChIPpeakAnno to find peaks nearest to miRNA
13.4 years ago Paolo Kunderfranco ▴ 350
0
votes
3
replies
2.2k
views
ChIPpeakAnno to find peaks nearest to miRNA
miRNA GO BSgenome BSgenome ChIPpeakAnno miRNA GO BSgenome BSgenome ChIPpeakAnno
updated 13.4 years ago by ★ 4.3k • written 13.4 years ago by ▴ 350
0
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0
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1.1k
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ChIPpeakAnno - Annotation of miRNA
miRNA GO BSgenome BSgenome ChIPpeakAnno miRNA GO BSgenome BSgenome ChIPpeakAnno
13.4 years ago Paolo Kunderfranco ▴ 350
0
votes
1
reply
1.6k
views
lumi - construct a design matrix
lumi CMA lumi CMA
updated 13.4 years ago by ▴ 260 • written 13.4 years ago by ▴ 350
0
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1
reply
1.7k
views
Comment: C: #Identify differentially expressed genes
13.4 years ago Paolo Kunderfranco ▴ 350
0
votes
1
reply
1.2k
views
LumiT VST error
lumi lumi
updated 13.7 years ago by ▴ 440 • written 13.7 years ago by ▴ 350
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