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520
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Custom dispersion estimate DESeq2
deseq2 edger
updated 3.7 years ago by ★ 28k • written 3.7 years ago by ▴ 110
3
votes
7
replies
1.1k
views
LIMMA: ~ continuous predictor by group. How to get within-group results?
limma interaction
3.7 years ago Sindre ▴ 110
4
votes
2
replies
903
views
Two-way interaction, linear redundancy
limma caret lm lmer lme4
updated 4.8 years ago by ★ 28k • written 4.8 years ago by ▴ 110
0
votes
2
replies
2.2k
views
Best way of presenting "absolute" expression values (edgeR)
RNASeq edgeR RNASeq edgeR
updated 14 months ago by 50k • written 10.0 years ago by ▴ 110
0
votes
1
reply
910
views
Quick question about Chromosome names using Tophat2 and Cufflinks w/Ensembl NCBIM37
updated 10.1 years ago by 65k • written 10.1 years ago by ▴ 110
0
votes
3
replies
2.5k
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edgeR: plotBCV, gof() and plotMDS, for outlier detection
edgeR edgeR
updated 10.2 years ago by ▴ 840 • written 10.2 years ago by ▴ 110
0
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0
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1.7k
views
Labeling BAM files in Cufflinks/Cuffdiff input
10.3 years ago Sindre ▴ 110
0
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4
replies
1.4k
views
edgeR with two different groups (unpaired) at two time points (paired): Need some input
edgeR edgeR
updated 10.5 years ago by 50k • written 10.5 years ago by ▴ 110
0
votes
0
replies
781
views
edgeR with two different groups (unpaired) at two time points (paired): Need some input
10.5 years ago Sindre ▴ 110
0
votes
1
reply
1.4k
views
Paired data for DEseq2: Multifactorial design
limma limma
updated 10.5 years ago by 41k • written 10.5 years ago by ▴ 110
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