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Comment: C: DESeq2: Paired multifactor test with batch effect - one or more variables in des
5.3 years ago erin.gill81 ▴ 60
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2
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DESeq2: Paired multifactor test with batch effect - one or more variables in design formula are linear combinations of others
deseq2
updated 5.3 years ago by 43k • written 5.3 years ago by ▴ 60
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Answer: A: DESeq2 Error in .Primitive("c")(<S4 object of class "GRangesList">
7.7 years ago erin.gill81 ▴ 60
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2
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1.2k
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DESeq2 Error in .Primitive("c")(<S4 object of class "GRangesList">
deseq2 genomicranges differential gene expression
7.7 years ago erin.gill81 ▴ 60
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1.3k
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Comment: C: DESeq2 Finding genotype effect to stimulation minus effect of not stimulating
8.9 years ago erin.gill81 ▴ 60
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3
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1.3k
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DESeq2 Finding genotype effect to stimulation minus effect of not stimulating
deseq2 rna-seq
updated 8.9 years ago by 43k • written 8.9 years ago by ▴ 60
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3.0k
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Answer: A: DESeq2 different results from similar datasets
9.0 years ago erin.gill81 ▴ 60
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2
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3.0k
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DESeq2 different results from similar datasets
deseq2 differential gene expression rna-seq
9.0 years ago erin.gill81 ▴ 60
0
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1
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1.1k
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DESeq2 Contrast and Design Matrix Question: 4 Experimental Factors
deseq2 rnaseq
updated 9.1 years ago by 43k • written 9.1 years ago by ▴ 60
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1
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1.7k
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Nested Comparison using DESeq2
deseq2 rnaseq
updated 9.7 years ago by ★ 7.9k • written 9.7 years ago by ▴ 60
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Comment: C: 3D PCA Plot of RNA-seq Data using plotPCA from within DESeq2
9.7 years ago erin.gill81 ▴ 60
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4
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17k
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3D PCA Plot of RNA-seq Data using plotPCA from within DESeq2
deseq2 rnaseq PCA
updated 9.7 years ago by 43k • written 9.7 years ago by ▴ 60
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14k
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Comment: C: DESeq2 Error: rows did not converge in beta, labelled in mcols(object)$betaConv.
9.8 years ago erin.gill81 ▴ 60
0
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1
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14k
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Comment: C: DESeq2 Error: rows did not converge in beta, labelled in mcols(object)$betaConv.
9.8 years ago erin.gill81 ▴ 60
0
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1
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14k
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Answer: A: DESeq2 Error: rows did not converge in beta, labelled in mcols(object)$betaConv.
9.8 years ago erin.gill81 ▴ 60
8
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6
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14k
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DESeq2 Error: rows did not converge in beta, labelled in mcols(object)$betaConv. Use larger maxit argument with nbinomWaldTest
deseq2
9.8 years ago erin.gill81 ▴ 60
3
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5
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4.3k
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DESeq2: making specific comparisons between samples that have two conditions and two groups
deseq2
updated 10.2 years ago by ★ 13k • written 10.2 years ago by ▴ 60
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