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Comment: C: TopGo package
11.7 years ago Adrian Alexa ▴ 400
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Student Internships at Illumina Cambridge Ltd, UK
Sequencing BaseSpaceR Sequencing BaseSpaceR
11.8 years ago Adrian Alexa ▴ 400
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Comment: C: Find enriched GO terms, given a list of GO terms of interest and background GO t
11.8 years ago Adrian Alexa ▴ 400
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New GO terms after TopGO enrichment? (updated)
GO topGO GO topGO
updated 12.1 years ago by ▴ 160 • written 12.1 years ago by ▴ 400
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topGO analysis returns different gene counts for category than given for non-model organism
Annotation GO topGO Annotation GO topGO
updated 12.2 years ago by ▴ 20 • written 12.2 years ago by ▴ 400
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Answer: A: [topGO] More flexible way to select 'interesting' genes
12.3 years ago Adrian Alexa ▴ 400
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Answer: A: topGO Fisher test error
12.6 years ago Adrian Alexa ▴ 400
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Answer: A: Student Internships at Illumina Cambridge Ltd.
12.7 years ago Adrian Alexa ▴ 400
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1.5k
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Student Internships at Illumina Cambridge Ltd.
Sequencing Sequencing
12.7 years ago Adrian Alexa ▴ 400
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how to supply a vector/list of results to GenTable in topGO?
GO PROcess topGO GO PROcess topGO
12.8 years ago Adrian Alexa ▴ 400
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Answer: A: problems generating a gene2GOlist in topGO
13.7 years ago Adrian Alexa ▴ 400
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Answer: A: topGO sensitive to the order of "interesting" gene ids
14.8 years ago Adrian Alexa ▴ 400
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extracting topGO gene ids from result object
Annotation GO graph GOstats topGO Annotation GO graph GOstats topGO
updated 14.9 years ago by ▴ 20 • written 14.9 years ago by ▴ 400
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Answer: A: topGO and Arabidopsis data
15.0 years ago Adrian Alexa ▴ 400
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Answer: A: topGO documentation / clarification
15.3 years ago Adrian Alexa ▴ 400
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Answer: A: Gene Ontology analysis for non-affy data
16.2 years ago Adrian Alexa ▴ 400
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Answer: A: error with display of significant nodes using topGO
16.2 years ago Adrian Alexa ▴ 400
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Comment: C: "topGOdata" object: How to supply gene scores with a predefined list of genes
16.2 years ago Adrian Alexa ▴ 400
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Answer: A: "topGOdata" object: How to supply gene scores with a predefined list of genes
16.2 years ago Adrian Alexa ▴ 400
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3.5k
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Comment: C: annFUN.gene2GO in topGO package
16.3 years ago Adrian Alexa ▴ 400
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Comment: C: Analysis HumanHT-12 Illumina
16.4 years ago Adrian Alexa ▴ 400
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Answer: A: topGO enrichment using ensembl gene list
16.7 years ago Adrian Alexa ▴ 400
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Answer: A: Bug in topGO-package [topGO_1.10.0: GenTable-function]
17.0 years ago Adrian Alexa ▴ 400
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Comment: C: topGO question
17.2 years ago Adrian Alexa ▴ 400
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Answer: A: topGO question
17.2 years ago Adrian Alexa ▴ 400
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Answer: A: new topGO results using GO.db very different from old ones using GO
17.6 years ago Adrian Alexa ▴ 400
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topGO and GOstats conflict
GO GOstats topGO GO GOstats topGO
17.6 years ago Adrian Alexa ▴ 400
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topGO enrichment using ensembl gene list
Microarray Annotation GO PROcess globaltest topGO Microarray Annotation GO PROcess topGO
17.6 years ago Adrian Alexa ▴ 400
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Answer: A: GO-Analysis using TopGO for Yeast2 data
17.7 years ago Adrian Alexa ▴ 400
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Answer: A: how can I use the limma result as input in topGo
18.0 years ago Adrian Alexa ▴ 400
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Comment: C: how to build a GOstats-compatible annotation package for plasmodium falciparum?
18.0 years ago Adrian Alexa ▴ 400
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Answer: A: GO analysis code snippet
18.3 years ago Adrian Alexa ▴ 400
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Postdoctoral position for 'Statistical Methods in Bioinformatics'
Genetics HIV Genetics HIV
19.0 years ago Adrian Alexa ▴ 400
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4.0k
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More advance node labeling in Graphviz
Rgraphviz Rgraphviz
updated 21.0 years ago by ★ 13k • written 21.0 years ago by ▴ 400
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775
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Bug in function hasGOannote() form GOstats package
GOstats GOstats
21.0 years ago Adrian Alexa ▴ 400
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770
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Comment: C: More environments facilities ?
21.1 years ago Adrian Alexa ▴ 400
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2
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770
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More environments facilities ?
Biobase Biobase
updated 21.1 years ago by ★ 5.5k • written 21.1 years ago by ▴ 400
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