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How to keep track of gene names during WGCNA analysis for cutTreedynamic() and moduleEigengene()?
WGCNA cbind merge match gene names and Eigengene/module/colorlabels
7.0 years ago yifangt ▴ 20
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Comment: C: WGCNA error on block number related.
7.1 years ago yifangt ▴ 20
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Comment: C: Where is the "RNAseq2 level 3" data
7.1 years ago yifangt ▴ 20
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2
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Where is the "RNAseq2 level 3" data
concatenated TCGA files RNASeq matrix
7.1 years ago yifangt ▴ 20
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3
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3.1k
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WGCNA error on block number related.
WGCNA block size subscript out of bounds
7.1 years ago yifangt ▴ 20
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2.7k
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Comment: C: WGCNA with distance matrix only from newick data.
7.1 years ago yifangt ▴ 20
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2.7k
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Comment: C: WGCNA with distance matrix only from newick data.
7.1 years ago yifangt ▴ 20
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2.7k
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Comment: C: WGCNA with distance matrix only from newick data.
7.1 years ago yifangt ▴ 20
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6
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2.7k
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WGCNA with distance matrix only from newick data.
WGCNA eigengene hub genes
7.1 years ago yifangt ▴ 20
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3.8k
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Answer: A: Making a circos plot to show expression for a gene set rather than whole genome
7.3 years ago yifangt ▴ 20
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3.8k
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Comment: C: Making a circos plot to show expression for a gene set rather than whole genome
7.3 years ago yifangt ▴ 20
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1
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15k
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Comment: C: Count matrix from Kallisto as input for DESeq2
7.4 years ago yifangt ▴ 20
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1
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15k
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Comment: C: Count matrix from Kallisto as input for DESeq2
7.4 years ago yifangt ▴ 20
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2.2k
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Comment: C: SummarizedExperiment Error! expressionSet data structure
8.7 years ago yifangt ▴ 20
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1
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2.2k
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Comment: C: SummarizedExperiment Error! expressionSet data structure
8.7 years ago yifangt ▴ 20
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2.2k
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Comment: C: SummarizedExperiment Error! expressionSet data structure
8.7 years ago yifangt ▴ 20
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8
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2.2k
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SummarizedExperiment Error! expressionSet data structure
software error summarizedexperiment
updated 8.7 years ago by 25k • written 8.7 years ago by ▴ 20
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2.2k
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Answer: A: SummarizedExperiment Error! expressionSet data structure
8.7 years ago yifangt ▴ 20
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1
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3.6k
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Comment: C: DESeq2 RNAseq analysis with "matrix not full rank" error corrected.
8.8 years ago yifangt ▴ 20
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3.6k
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Comment: C: DESeq2 RNAseq analysis with "matrix not full rank" error corrected.
8.8 years ago yifangt ▴ 20
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3.6k
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Answer: A: DESeq2 RNAseq analysis with "matrix not full rank" error corrected.
8.8 years ago yifangt ▴ 20
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12
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3.6k
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DESeq2 RNAseq analysis with "matrix not full rank" error corrected.
deseq2 multiple factor design
8.8 years ago yifangt ▴ 20
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1
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3.6k
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Answer: A: DESeq2 RNAseq analysis with "matrix not full rank" error corrected.
8.8 years ago yifangt ▴ 20
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