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Created An Answer That Has Been Accepted
Awarded 5048 times (see all awards). Earned by the
following contributors:
8 years, 4 months ago
Seattle, WA, United States
A: troubleshooting makeTxDbFromGRanges: some exons are linked to transcripts not fo
8 years, 5 months ago
Seattle, WA, United States
A: Behaviour of within in findOverlaps function in connection with maxgap parameter
8 years, 5 months ago
Seattle, WA, United States
A: CRISPRseek with (rough) Draft Genome
8 years, 5 months ago
Seattle, WA, United States
A: Cannot load old SummarizedExperiment in R 3.3, Bioc 3.3
8 years, 6 months ago
Seattle, WA, United States
A: Use matchPattern for large DNAStrings
8 years, 6 months ago
Seattle, WA, United States
A: Requesting flank sequences (BioMart::Exception)
8 years, 6 months ago
Seattle, WA, United States
A: Is there a way to remove or take the first overlapping gene(s) when using makeTx
8 years, 6 months ago
Seattle, WA, United States
A: pairwiseAlignments coordinate mapping?
8 years, 6 months ago
Seattle, WA, United States
A: overlapsAny for elements in GRangesList
8 years, 7 months ago
Seattle, WA, United States
A: mRNA start used instead of gene start in makeTxDbFromGFF
8 years, 7 months ago
Seattle, WA, United States
resize (shrink/expand) GenomicRanges
8 years, 7 months ago
Seattle, WA, United States
mRNA start used instead of gene start in makeTxDbFromGFF
8 years, 7 months ago
Seattle, WA, United States
calculate frequency of non-overlapping matches for a motif in a XStringSet
8 years, 7 months ago
Seattle, WA, United States
overlapsAny for elements in GRangesList
8 years, 7 months ago
Seattle, WA, United States
How to add chromosomes to a BSgenome ?
8 years, 7 months ago
Seattle, WA, United States
Generating a proper TxDb instance from NCBI GFF Annotations File
8 years, 7 months ago
Seattle, WA, United States
Memory-efficient method to calculate GC content of millions of GRanges
8 years, 7 months ago
Seattle, WA, United States
How to avoid repeated overlap pair for GRanges object in grid?
8 years, 7 months ago
Seattle, WA, United States
troubleshooting makeTxDbFromGRanges: some exons are linked to transcripts not found in the file
8 years, 7 months ago
Seattle, WA, United States
getting a directed and unweighted adjacency matrix with igraph package
8 years, 7 months ago
Seattle, WA, United States
GenomeInfoDb::extractSeqlevelsByGroup() on 'Canis familiaris'
8 years, 7 months ago
Seattle, WA, United States
SNP extraction from SNPlocs.Hsapiens.dbSNP144.GRCh38
8 years, 7 months ago
Seattle, WA, United States
how much positions overlapped for each pair of the pairs obtained by findoverlap.
8 years, 7 months ago
Seattle, WA, United States
vcountPattern for Pattern Contained within or Containing Subject
8 years, 7 months ago
Seattle, WA, United States
XStringSet operations discard names - how to address?
8 years, 7 months ago
Seattle, WA, United States
problem with @ranges@start in DNAStringSet
8 years, 7 months ago
Seattle, WA, United States
pairwiseAlignments coordinate mapping?
8 years, 7 months ago
Seattle, WA, United States
matching of AAStringSet vs. another AAStringSet
8 years, 7 months ago
Seattle, WA, United States
Cannot load old SummarizedExperiment in R 3.3, Bioc 3.3
8 years, 7 months ago
Seattle, WA, United States
Requesting flank sequences (BioMart::Exception)
8 years, 8 months ago
Seattle, WA, United States
calculate frequency of non-overlapping matches for a motif in a XStringSet
8 years, 8 months ago
Seattle, WA, United States
Generating a proper TxDb instance from NCBI GFF Annotations File
8 years, 9 months ago
Seattle, WA, United States
calculate frequency of non-overlapping matches for a motif in a XStringSet
8 years, 9 months ago
Seattle, WA, United States
A: unexpected error when creating GRanges object by calling makeGRangesFromDataFram
8 years, 9 months ago
Seattle, WA, United States
calculate frequency of non-overlapping matches for a motif in a XStringSet
8 years, 9 months ago
Seattle, WA, United States
A: calculate frequency of non-overlapping matches for a motif in a XStringSet
8 years, 10 months ago
Seattle, WA, United States
calculate frequency of non-overlapping matches for a motif in a XStringSet
8 years, 10 months ago
Seattle, WA, United States
Generating a proper TxDb instance from NCBI GFF Annotations File
8 years, 10 months ago
Seattle, WA, United States
A: What is the main difference between nclist and intervaltree algorithm in Genomic
8 years, 10 months ago
Seattle, WA, United States
Generating a proper TxDb instance from NCBI GFF Annotations File
8 years, 10 months ago
Seattle, WA, United States
A: Generating a proper TxDb instance from NCBI GFF Annotations File
8 years, 10 months ago
Seattle, WA, United States
GenomeInfoDb::extractSeqlevelsByGroup() on 'Canis familiaris'
8 years, 10 months ago
Seattle, WA, United States
getting a directed and unweighted adjacency matrix with igraph package
8 years, 10 months ago
Seattle, WA, United States
A: getting a directed and unweighted adjacency matrix with igraph package
8 years, 11 months ago
Seattle, WA, United States
GenomeInfoDb::extractSeqlevelsByGroup() on 'Canis familiaris'
8 years, 11 months ago
Seattle, WA, United States
A: How to find similar ranges without algorithm="intervaltree"
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