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Question: Trouble installing bioconductor packages: ERROR: sub-architecture 'R' is not installed
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gravatar for brt381
6 days ago by
brt3810
Canada
brt3810 wrote:

When I try to install the Bioconductor package org.Hs.eg.db (as well as certain other packages) on Mac OS X, I get the error message "ERROR: sub-architecture 'R' is not installed". For (e.g.) github packages, I can get rid of this error by saying:

install_github("package_name", args="--no-multiarch")

But how do I do this for Bioconductor packages?

Thanks in advance!

ADD COMMENTlink modified 6 days ago by Martin Morgan ♦♦ 21k • written 6 days ago by brt3810
2
gravatar for Martin Morgan
6 days ago by
Martin Morgan ♦♦ 21k
United States
Martin Morgan ♦♦ 21k wrote:

I think you meanĀ install_github("package_name", INSTALL_opts="no-multiarch") ? The same syntax is supported by biocLite("org.Hs.eg.db", INSTALL_opts="no-multiarch"). Both install_github() and biocLite() are wrappers around install.packages(), and forward arguments there. `

ADD COMMENTlink modified 6 days ago • written 6 days ago by Martin Morgan ♦♦ 21k

Great, thank you! Although it should be INSTALL_opts="--no-multiarch" rather thanĀ INSTALL_opts="no-multiarch".

ADD REPLYlink written 1 day ago by brt3810
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