News:ensembl 92 gtfs and fasta twobits have been added to AnnotationHub
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shepherl 2.8k
@lshep
Last seen 1 day ago
United States

Hello all,

The ensembl 92 gtf (converted to GRanges on the fly) and fasta (twobit files) been added to AnnotationHub and are currently available in Bioc 3.7

Bioconductor version 3.7 (BiocInstaller 1.29.6), ?biocLite for help

> library(AnnotationHub) 
> hub = AnnotationHub() 
snapshotDate(): 2018-04-19 
> length(query(hub, c("ensembl", "gtf", "release-92"))) 
[1] 282 
> length(query(hub, c("fasta", "release-92", "twobit"))) 
[1] 453
ensembl gtf 2bit annotationhub News • 525 views
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