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News: Join the Technical Advisory Board
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19 months ago Maria Doyle ▴ 90
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News: Final List of Deprecated Package Bioc 3.9
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News: Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
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19 months ago Maria Doyle ▴ 90
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News: Registrations are now open for BioC Asia 2022
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2.2 years ago • updated 2.1 years ago Peter Hickey ▴ 740
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News: New Bioconductor Community Advisory Board Members for 2021
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3.7 years ago Matthew Ritchie ▴ 1000
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News: Join the Bioconductor Community Advisory Board
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News: Early career researchers: nominate to present your work at BVCN virtual conference on microbiome research
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3.8 years ago Matthew Ritchie ▴ 1000
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4.1 years ago shepherl 4.1k
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DESeq2 multiple groups comparison issues, incorrect log2FC results in a small proportion of genes
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News: Final List of Deprecated Packages for Bioc3.12
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4.2 years ago • updated 4.1 years ago shepherl 4.1k
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4.1 years ago egon.willighagen ▴ 10
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News: Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
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4.1 years ago kayla.interdonato ▴ 160
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4.2 years ago Laurent Gatto 1.6k
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News: List of Deprecated Packages for Bioc3.12
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4.3 years ago • updated 4.2 years ago shepherl 4.1k
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News: New Package Submission Deadline for Bioc Release 3.12
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News: ensembldb EnsDb databases for Ensembl release 101 added to AnnotationHub
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4.3 years ago Johannes Rainer ★ 2.1k
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4.3 years ago mchakiachvili ▴ 20
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4.7 years ago • updated 4.5 years ago shepherl 4.1k
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4.5 years ago shepherl 4.1k
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4.5 years ago shepherl 4.1k
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4.5 years ago shepherl 4.1k
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4.5 years ago shepherl 4.1k
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News: List of Deprecated Packages for Bioc3.12
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4.5 years ago shepherl 4.1k
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News: New Package Bioconductor Award
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4.5 years ago shepherl 4.1k
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4.5 years ago shepherl 4.1k
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News: Updated annotation packages
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4.5 years ago kayla.interdonato ▴ 160
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News: Nominations for Bioconductor Awards!
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4.6 years ago • updated 4.5 years ago shepherl 4.1k
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4.5 years ago shepherl 4.1k
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News: Bioconductor Technical Advisory Board Nominees, 2020
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written 4.5 years ago by 25k
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News: Public Calendar of Events
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4.6 years ago shepherl 4.1k
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News: ensembldb EnsDb databases for Ensembl release 100 added to AnnotationHub
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4.6 years ago Johannes Rainer ★ 2.1k
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News: Issues with annotation packages
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4.6 years ago kayla.interdonato ▴ 160
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News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 4.6 years ago by ▴ 160 • written 4.7 years ago by 4.1k
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News: Bioconductor 3.11 OrgDb and TxDb packages now available
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4.6 years ago kayla.interdonato ▴ 160
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937
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News: Ensembl 100 has been released
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4.6 years ago Thomas Maurel ▴ 800
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959
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News: Bioconductor 3.11 is Released!
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4.6 years ago shepherl 4.1k
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News: BridgeDb build fails due to website unavailability
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5.0 years ago • updated 4.6 years ago egon.willighagen ▴ 10
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News: Import Deadlines for RELEASE 3.11
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4.6 years ago shepherl 4.1k
10
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News: Professor James Taylor
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4.7 years ago Martin Morgan 25k
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News: Last Day to Submit New Packages for Bioconductor Release 3.11
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4.7 years ago shepherl 4.1k
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News: Bioconductor Community Advisory Board Members
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4.7 years ago Matthew Ritchie ▴ 1000
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News: New Package and New Docker Image Submission Deadline for Bioc Release 3.11
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4.7 years ago shepherl 4.1k
50 results • Page 1 of 1
Recent ...
Replies
Comment: Running multiple KNN queries in parallel by SamGG ▴ 360
Thank you for your detailed answer, I appreciate it and your work.
Answer: Running multiple KNN queries in parallel by Aaron Lun ★ 28k
That is correct - you can't pass the prebuilt objects to different processes. Maybe `MulticoreParam()` might work on POSIX systems but I'm …
Answer: RSubread output significantly different from bash Subread output by Gordon Smyth 52k
The difference (as ATpoint has correctly pointed out) is that Rsubread::featureCounts counts multi-mapping reads by default whereas the com…
Answer: Deseq2 Error in solve.default(qr.R(qrx)) : 'a' (1 x 0) must be square by Michael Love 43k
I would check the rank of your model matrix, and perhaps meet with a local statistician who can help you create an appropriate design matri…
Comment: sva: get a sv for RIN scores by gabriel.hoffman ▴ 170
Agreed. I'll add that with small sample size, a covariate can explain some fraction of expression variation even under the null.
Votes
Answer: Running multiple KNN queries in parallel
Answer: Running multiple KNN queries in parallel
Answer: RSubread output significantly different from bash Subread output
Answer: RSubread output significantly different from bash Subread output
Answer: How to annotate a limma Elist raw class object with an annotation file
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