I am having a difficult time using biocLite to install IlluminaMethylationManifest. I received this message:
> biocLite("IlluminaMethylationManifest") BioC_mirror: https://bioconductor.org Using Bioconductor 3.7 (BiocInstaller 1.30.0), R 3.5.0 (2018-04-23). Installing package(s) ‘IlluminaMethylationManifest’ installation path not writeable, unable to update packages: MASS, survival Old packages: 'BiocParallel' Update all/some/none? [a/s/n]:
So I found the download and removed the .tar.gz and then moved the files to my R library but that gave me this:
> library(IlluminaHumanMethylation450kmanifest) Error in library(IlluminaHumanMethylation450kmanifest) : ‘IlluminaHumanMethylation450kmanifest’ is not a valid installed package
How do I get the package to install correctly?