I get the following error message on combining this dataset I have using the following command:
MSnset_comb_norr <- MSnbase::combine(MSnset_Set1,MSnset_Set2,MSnset_Set3,MSnset_Set4) Error in combine(x[[nm]], y[[nm]]) : matrix shared row and column elements differ: Mean relative difference: 0.4045317
The error occurs if I combine MSnsetSet4 as it works fine till MSnsetSet3.
For Reference the object dimensions are as below
dim(exprs(MSnset_Set4)) 12426 10 dim(exprs(MSnset_Set3)) 13260 10 dim(exprs(MSnset_Set2)) 11117 10 dim(exprs(MSnset_Set1)) 11973 10
This is first time I am getting this message as the combine function works fine otherwise. Any suggestions regarding this would be highly appreciated.