News: ensembl 95 gtfs and fasta twobits have been added to AnnotationHub
gravatar for shepherl
5 weeks ago by
shepherl ♦♦ 1.2k
United States
shepherl ♦♦ 1.2k wrote:

We apologize for the delay:

The ensembl 95 gtf (converted to GRanges on the fly) and fasta (twobit files) been added to AnnotationHub and are currently available in Bioc 3.9

Bioconductor version 3.9 (BiocManager 1.30.4), ?BiocManager::install for help
> hub = AnnotationHub()
snapshotDate(): 2019-02-15
> length(query(hub, c("ensembl", "gtf", "release-95")))
[1] 391
> length(query(hub, c("fasta", "release-95", "twobit")))
[1] 651
ADD COMMENTlink written 5 weeks ago by shepherl ♦♦ 1.2k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 314 users visited in the last hour