I read in the NOISeq Users Guide that it use counts from TopHat. I have some trouble to use TopHat with my raw data: it is paired data. So, I ask if is possible to run RSubread, got a lot of files (I use gappedIndex=TRUE) and I think that NOISeq use only one index. Please, is it possible to you provide me a step-by-step on how I could make an Index and use it on NOISeq?
Question: Is possible to use NOISeq with counts from RSubread?
4 months ago by
Marcelo Laia • 430
Marcelo Laia • 430 wrote:
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