Just wondering if anyone has used 'Ensembl VEP' or R package 'ensemblVEP' before? I've got some questions here. I am new to R package 'ensemblVEP', but when I first library it, I found in the instruction that I need to install the 'Ensembl VEP'. so I tried to install this via windows cmd.
when I tried to install it I tried 'perl INSTALL.pl'. However, it returned "'which' is not recognized as an internal or external command, operable program or batch file."
then I tried to install with '--NO_HTSLIB' however in this way the R package cannot work well (error message can be seen below)
I just want to make my R package work, what should I do?
Got stuck here. really appreciate for your help.
Thank you so much for your time